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Automatic Configuration GENerator and Installer for nextflow pipeline. This is a set of utilities to implement the best practises for the development of bioinformatics analysis pipelines with nextflow

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Geniac

Geniac is an Automatic Configuration GENerator and Installer for nextflow pipelines.

Documentation

  • The geniac documentation provides a set of best practises to implement Nextflow pipelines.
  • The geniac source code provides the set of utilities.
  • The geniac demo provides a toy pipeline to test and practise Geniac.
  • The geniac demo DSL2 provides a toy pipeline to test and practise Geniac with Nextflow DSL2.
  • The geniac template provides a pipeline template to start a new pipeline.

Acknowledgements

Citation

Allain F, Roméjon J, La Rosa P et al. Geniac: Automatic Configuration GENerator and Installer for nextflow pipelines. Open Research Europe 2021, 1:76

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Automatic Configuration GENerator and Installer for nextflow pipeline. This is a set of utilities to implement the best practises for the development of bioinformatics analysis pipelines with nextflow

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