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@bioio-devs

Bio IO Devs

Repositories for bioio reader and its plug-ins

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  1. bioio bioio Public

    Image reading, metadata management, and image writing for Microscopy images in Python

    Python 94 7

  2. bioio-base bioio-base Public

    Typing, base classes, and more for BioIO projects.

    Python

  3. bioio-ome-zarr bioio-ome-zarr Public

    A BioIO reader plugin for reading Zarr files in the OME format.

    Python 2 2

  4. bioio-ome-tiff bioio-ome-tiff Public

    A BioIO reader plugin for reading Tiff files in the OME format.

    Python 2 2

Repositories

Showing 10 of 16 repositories
  • bioio-ome-zarr Public

    A BioIO reader plugin for reading Zarr files in the OME format.

    bioio-devs/bioio-ome-zarr’s past year of commit activity
    Python 2 BSD-3-Clause 2 8 2 Updated Jul 23, 2025
  • bioio-bioformats Public

    A BioIO reader plugin for reading bioformats formatted images.

    bioio-devs/bioio-bioformats’s past year of commit activity
    Python 1 GPL-3.0 1 1 1 Updated Jul 21, 2025
  • bioio-tifffile Public

    A BioIO reader plugin for reading TIFFs using Tifffile

    bioio-devs/bioio-tifffile’s past year of commit activity
    Python 1 BSD-3-Clause 5 2 0 Updated Jul 21, 2025
  • bioio-sldy Public

    A BioIO reader plugin for reading 3i slidebook (SLDY) images

    bioio-devs/bioio-sldy’s past year of commit activity
    Python 0 BSD-3-Clause 1 2 0 Updated Jul 21, 2025
  • cookiecutter-bioio-reader Public

    A cookiecutter template for creating a new BioIO file format reader plugin.

    bioio-devs/cookiecutter-bioio-reader’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Jul 21, 2025
  • bioio-czi Public

    A BioIO reader plugin for reading CZI files.

    bioio-devs/bioio-czi’s past year of commit activity
    Python 4 GPL-3.0 2 8 0 Updated Jul 21, 2025
  • bioio-dv Public

    A BioIO reader plugin for reading Digital Video (DV) files.

    bioio-devs/bioio-dv’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Jul 21, 2025
  • bioio-ome-tiled-tiff Public

    A BioIO reader plugin for reading tiled tiff files in the OME format.

    bioio-devs/bioio-ome-tiled-tiff’s past year of commit activity
    Python 1 BSD-3-Clause 0 1 0 Updated Jul 21, 2025
  • bioio-nd2 Public

    A BioIO reader plugin for reading ND2 images.

    bioio-devs/bioio-nd2’s past year of commit activity
    Python 0 BSD-3-Clause 1 2 1 Updated Jul 21, 2025
  • bioio-lif Public

    A BioIO reader plugin for reading LIF (Leica Image File) images.

    bioio-devs/bioio-lif’s past year of commit activity
    Python 1 GPL-3.0 1 3 1 Updated Jul 21, 2025
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