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Bio IO Devs

Repositories for bioio reader and its plug-ins

7 followers
https://bioio-devs.github.io/bioio/

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bioio bioio Public

Image reading, metadata management, and image writing for Microscopy images in Python

Python 100 9
bioio-base bioio-base Public

Typing, base classes, and more for BioIO projects.

Python
bioio-ome-zarr bioio-ome-zarr Public

A BioIO reader plugin for reading Zarr files in the OME format.

Python 2 3
bioio-ome-tiff bioio-ome-tiff Public

A BioIO reader plugin for reading Tiff files in the OME format.

Python 2 2

Repositories

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Showing 10 of 16 repositories

bioio-nd2 Public
A BioIO reader plugin for reading ND2 images.

bioio-devs/bioio-nd2’s past year of commit activity

Python 0 BSD-3-Clause 1 0 0 Updated Sep 11, 2025
bioio-lif Public
A BioIO reader plugin for reading LIF (Leica Image File) images.

bioio-devs/bioio-lif’s past year of commit activity

Python 1 GPL-3.0 1 2 0 Updated Sep 10, 2025
bioio-czi Public
A BioIO reader plugin for reading CZI files.

bioio-devs/bioio-czi’s past year of commit activity

Python 4 GPL-3.0 2 11 0 Updated Sep 9, 2025
cookiecutter-bioio-reader Public
A cookiecutter template for creating a new BioIO file format reader plugin.

bioio-devs/cookiecutter-bioio-reader’s past year of commit activity

Python 0 BSD-3-Clause 0 0 0 Updated Sep 9, 2025
bioio-sldy Public
A BioIO reader plugin for reading 3i slidebook (SLDY) images

bioio-devs/bioio-sldy’s past year of commit activity

Python 0 BSD-3-Clause 1 2 0 Updated Sep 9, 2025
bioio-imageio Public
A BioIO reader plugin for reading simple image and movie formats

bioio-devs/bioio-imageio’s past year of commit activity

Python 1 BSD-3-Clause 1 0 0 Updated Sep 9, 2025
bioio-tiff-glob Public
A BioIO reader plugin for reading Tiff Glob images.

bioio-devs/bioio-tiff-glob’s past year of commit activity

Python 0 BSD-3-Clause 0 0 0 Updated Sep 9, 2025
bioio-ome-zarr Public
A BioIO reader plugin for reading Zarr files in the OME format.

bioio-devs/bioio-ome-zarr’s past year of commit activity

Python 2 BSD-3-Clause 3 10 0 Updated Sep 9, 2025
bioio Public
Image reading, metadata management, and image writing for Microscopy images in Python

bioio-devs/bioio’s past year of commit activity

Python 100 BSD-3-Clause 9 12 0 Updated Sep 3, 2025
bioio-bioformats Public
A BioIO reader plugin for reading bioformats formatted images.

bioio-devs/bioio-bioformats’s past year of commit activity

Python 1 GPL-3.0 3 2 1 Updated Sep 2, 2025

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