Merge pull request #161 from biolink/biolink-4.1.4

updating biolink 4.1.4
biolink · Mar 1, 2024 · 4d6fb77 · 4d6fb77
2 parents 8a8ce0d + 57f3eb1
commit 4d6fb77
Show file tree

Hide file tree

Showing 2 changed files with 2 additions and 4 deletions.
diff --git a/bmt/toolkit.py b/bmt/toolkit.py
@@ -21,7 +21,7 @@
 Url = str
 Path = str
 
-LATEST_BIOLINK_RELEASE = "4.0.0"
+LATEST_BIOLINK_RELEASE = "4.1.4"
 
 REMOTE_PATH = f"https://raw.githubusercontent.com/biolink/biolink-model/v{LATEST_BIOLINK_RELEASE}/biolink-model.yaml"
 PREDICATE_MAP = f"https://raw.githubusercontent.com/biolink/biolink-model/v{LATEST_BIOLINK_RELEASE}/predicate_mapping.yaml"

diff --git a/tests/unit/test_toolkit.py b/tests/unit/test_toolkit.py
@@ -663,8 +663,7 @@ def test_is_mixin(toolkit):
 
 
 def test_is_translator_canonical_predicate(toolkit):
-    assert toolkit.is_translator_canonical_predicate("treats")
-    assert not toolkit.is_translator_canonical_predicate("treated by")
+    assert toolkit.is_translator_canonical_predicate("studied to treat")
     assert not toolkit.is_translator_canonical_predicate("this_does_not_exist")
     assert not toolkit.is_translator_canonical_predicate("completed by")
     assert toolkit.is_translator_canonical_predicate("regulates")
@@ -952,7 +951,6 @@ def test_mapping(toolkit):
 
 
 def test_get_slot_domain(toolkit):
-    assert NAMED_THING in toolkit.get_slot_domain("ameliorates")
     assert "biological process" in toolkit.get_slot_domain(ENABLED_BY)
     assert "biological process or activity" in toolkit.get_slot_domain(ENABLED_BY)
     assert "pathway" in toolkit.get_slot_domain(