Name		Name	Last commit message	Last commit date
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core		core
main		main
test		test
weill		weill
.gitattributes		.gitattributes
.gitignore		.gitignore
README.md		README.md

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Vibrio cholerae

This repository contains code for the analysis and visualization of the 7PET (7th Pandemic) lineage of Vibrio cholera.

Weill: Nextstrain visualization of 7PET using an alignment from Weill et al (2019)
Test: Building and visualizing a 7PET phylogeny using Bactopia and Nextstrain
Fitness: ...

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