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Merge branch 'main' of github.com:boulardlab/3t-seq
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ftabaro committed Mar 6, 2024
2 parents c50b75e + ef99586 commit 4051f50
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion .github/workflows/main.yml
Original file line number Diff line number Diff line change
Expand Up @@ -58,6 +58,7 @@ jobs:
mamba install -c conda-forge -c bioconda snakemake=7.28.3 singularity
- name: Run workflow
run: |
ls -R tests/
snakemake --directory tests --configfile tests/config.yaml --profile tests/profile --snakefile workflow/Snakefile
run-workflow-no-te:
runs-on: ubuntu-latest
Expand Down Expand Up @@ -139,4 +140,4 @@ jobs:
mamba install -c conda-forge -c bioconda snakemake=7.28.3 singularity
- name: Run workflow
run: |
snakemake --directory tests --configfile tests/config-no-trna-te.yaml --profile tests/profile --snakefile workflow/Snakefile
snakemake --directory tests --configfile tests/config-no-trna-te.yaml --profile tests/profile --snakefile workflow/Snakefile

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