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@EtienneCmb
EtienneCmb committed Nov 6, 2023
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2 changes: 1 addition & 1 deletion .buildinfo
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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 968a368b567b8b335aab44351a6158e2
config: 848b2a678139eb36a0187172a626bdcb
tags: 645f666f9bcd5a90fca523b33c5a78b7
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28 changes: 14 additions & 14 deletions _sources/auto_examples/metrics/plot_oinfo.rst.txt
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Expand Up @@ -49,18 +49,18 @@ at.
.. code-block:: none
No GPU/TPU found, falling back to CPU. (Set TF_CPP_MIN_LOG_LEVEL=0 and rerun for more info.)
0%| | 0/12 [00:00<?, ?it/s] 8%|▊ | Entropy H(1): 1/12 [00:00<00:02, 3.74it/s] 17%|█▋ | Entropy H(2): 2/12 [00:00<00:02, 3.85it/s] 25%|██▌ | Entropy H(3): 3/12 [00:00<00:02, 3.84it/s] 33%|███▎ | Entropy H(4): 4/12 [00:01<00:02, 3.67it/s] 42%|████▏ | Entropy H(5): 5/12 [00:01<00:01, 3.72it/s] 50%|█████ | Entropy H(6): 6/12 [00:01<00:01, 3.74it/s] 58%|█████▊ | Entropy H(7): 7/12 [00:01<00:01, 4.04it/s] 67%|██████▋ | Entropy H(8): 8/12 [00:01<00:00, 4.29it/s] 75%|███████▌ | Entropy H(9): 9/12 [00:02<00:00, 4.51it/s] 83%|████████▎ | Entropy H(10): 10/12 [00:02<00:00, 4.70it/s] 92%|█████████▏| Entropy H(11): 11/12 [00:02<00:00, 4.88it/s] 100%|██████████| Entropy H(12): 12/12 [00:02<00:00, 4.92it/s] 0%| | 0/4017 [00:00<?, ?it/s] 10%|▉ | Mutual information: 400/4017 [00:00<00:00, 11221.69it/s] 15%|█▍ | Mutual information: 600/4017 [00:00<00:00, 8379.49it/s] 20%|█▉ | Mutual information: 800/4017 [00:00<00:00, 7427.84it/s] 25%|██▍ | Mutual information: 1000/4017 [00:00<00:00, 6955.15it/s] 30%|██▉ | Mutual information: 1200/4017 [00:00<00:00, 6675.07it/s] 35%|███▍ | Mutual information: 1400/4017 [00:00<00:00, 6489.86it/s] 40%|███▉ | Mutual information: 1600/4017 [00:00<00:00, 6350.16it/s] 45%|████▍ | Mutual information: 1800/4017 [00:00<00:00, 6255.85it/s] 50%|████▉ | Mutual information: 2000/4017 [00:00<00:00, 6152.12it/s] 55%|█████▍ | Mutual information: 2200/4017 [00:00<00:00, 6060.33it/s] 60%|█████▉ | Mutual information: 2400/4017 [00:00<00:00, 5916.26it/s] 65%|██████▍ | Mutual information: 2600/4017 [00:00<00:00, 5823.77it/s] 70%|██████▉ | Mutual information: 2800/4017 [00:00<00:00, 5754.53it/s] 75%|███████▍ | Mutual information: 3000/4017 [00:00<00:00, 5688.83it/s] 80%|███████▉ | Mutual information: 3200/4017 [00:00<00:00, 5534.07it/s] 85%|████████▍ | Mutual information: 3400/4017 [00:00<00:00, 5354.48it/s] 90%|████████▉ | Mutual information: 3600/4017 [00:00<00:00, 5369.16it/s] 95%|█████████▍| Mutual information: 3800/4017 [00:00<00:00, 5387.80it/s] 100%|█████████▉| Mutual information: 4000/4017 [00:00<00:00, 5405.42it/s] 100%|██████████| Mutual information: 4017/4017 [00:00<00:00, 5003.97it/s] 100%|██████████| Mutual information: 4017/4017 [00:00<00:00, 5275.45it/s]
index order hoi multiplet
0 200 3 0.234794 [6, 7, 8]
1 0 3 0.173667 [0, 1, 2]
2 1506 5 0.015755 [7, 8, 9, 10, 11]
3 1435 5 0.010154 [3, 5, 9, 10, 11]
4 1393 5 0.008303 [3, 4, 5, 9, 10]
5 1396 5 -0.013609 [3, 4, 6, 7, 8]
6 1381 5 -0.014934 [3, 4, 5, 6, 7]
7 595 4 -0.020742 [3, 4, 6, 7]
8 219 3 -0.712181 [9, 10, 11]
9 136 3 -0.798825 [3, 4, 5]
0%| | 0/12 [00:00<?, ?it/s] 8%|▊ | Entropy H(1): 1/12 [00:00<00:02, 4.94it/s] 17%|█▋ | Entropy H(2): 2/12 [00:00<00:01, 5.12it/s] 25%|██▌ | Entropy H(3): 3/12 [00:00<00:01, 5.12it/s] 33%|███▎ | Entropy H(4): 4/12 [00:00<00:01, 5.02it/s] 42%|████▏ | Entropy H(5): 5/12 [00:00<00:01, 5.05it/s] 50%|█████ | Entropy H(6): 6/12 [00:01<00:01, 5.07it/s] 58%|█████▊ | Entropy H(7): 7/12 [00:01<00:00, 5.44it/s] 67%|██████▋ | Entropy H(8): 8/12 [00:01<00:00, 5.71it/s] 75%|███████▌ | Entropy H(9): 9/12 [00:01<00:00, 5.95it/s] 83%|████████▎ | Entropy H(10): 10/12 [00:01<00:00, 6.17it/s] 92%|█████████▏| Entropy H(11): 11/12 [00:01<00:00, 6.36it/s] 100%|██████████| Entropy H(12): 12/12 [00:01<00:00, 6.44it/s] 0%| | 0/4017 [00:00<?, ?it/s] 10%|▉ | Mutual information: 400/4017 [00:00<00:00, 13593.05it/s] 15%|█▍ | Mutual information: 600/4017 [00:00<00:00, 10088.20it/s] 20%|█▉ | Mutual information: 800/4017 [00:00<00:00, 8921.74it/s] 25%|██▍ | Mutual information: 1000/4017 [00:00<00:00, 8252.97it/s] 30%|██▉ | Mutual information: 1200/4017 [00:00<00:00, 7862.61it/s] 35%|███▍ | Mutual information: 1400/4017 [00:00<00:00, 7594.85it/s] 40%|███▉ | Mutual information: 1600/4017 [00:00<00:00, 7428.24it/s] 45%|████▍ | Mutual information: 1800/4017 [00:00<00:00, 7272.82it/s] 50%|████▉ | Mutual information: 2000/4017 [00:00<00:00, 7169.20it/s] 55%|█████▍ | Mutual information: 2200/4017 [00:00<00:00, 7083.99it/s] 60%|█████▉ | Mutual information: 2400/4017 [00:00<00:00, 7032.95it/s] 65%|██████▍ | Mutual information: 2600/4017 [00:00<00:00, 6985.28it/s] 70%|██████▉ | Mutual information: 2800/4017 [00:00<00:00, 6922.35it/s] 75%|███████▍ | Mutual information: 3000/4017 [00:00<00:00, 6904.83it/s] 80%|███████▉ | Mutual information: 3200/4017 [00:00<00:00, 6884.34it/s] 85%|████████▍ | Mutual information: 3400/4017 [00:00<00:00, 6861.72it/s] 90%|████████▉ | Mutual information: 3600/4017 [00:00<00:00, 6845.47it/s] 95%|█████████▍| Mutual information: 3800/4017 [00:00<00:00, 6832.00it/s] 100%|█████████▉| Mutual information: 4000/4017 [00:00<00:00, 6812.77it/s] 100%|██████████| Mutual information: 4017/4017 [00:00<00:00, 6318.53it/s] 100%|██████████| Mutual information: 4017/4017 [00:00<00:00, 6592.57it/s]
index order hoi multiplet
0 200 3 0.388715 [6, 7, 8]
1 0 3 0.212811 [0, 1, 2]
2 2366 6 0.014927 [3, 4, 5, 9, 10, 11]
3 255 4 0.012493 [0, 1, 7, 8]
4 185 3 0.012488 [5, 6, 7]
5 204 3 -0.019895 [6, 8, 9]
6 2347 6 -0.023590 [3, 4, 5, 6, 7, 8]
7 1382 5 -0.024401 [3, 4, 5, 6, 8]
8 219 3 -0.581881 [9, 10, 11]
9 136 3 -0.718803 [3, 4, 5]
Expand Down Expand Up @@ -96,9 +96,9 @@ at.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 4.318 seconds)
**Total running time of the script:** (0 minutes 3.401 seconds)

**Estimated memory usage:** 135 MB
**Estimated memory usage:** 134 MB


.. _sphx_glr_download_auto_examples_metrics_plot_oinfo.py:
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74 changes: 37 additions & 37 deletions _sources/auto_examples/metrics/plot_rsi.rst.txt
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Expand Up @@ -108,13 +108,13 @@ we will observe redundancy between :math:`X_{1}, X_{2}, X_{3}` and :math:`Y`.

.. code-block:: none
0%| | 0/3 [00:00<?, ?it/s] 33%|███▎ | RSI order 3: 1/3 [00:00<00:01, 1.46it/s] 67%|██████▋ | RSI order 4: 2/3 [00:01<00:00, 2.00it/s] 100%|██████████| RSI order 5: 3/3 [00:01<00:00, 2.13it/s] index order hoi multiplet
0 0 3 0.032956 [0, 1, 2]
1 16 3 0.031921 [1, 2, 4]
2 18 3 0.027831 [1, 2, 6]
3 31 3 -0.284001 [3, 4, 5]
4 33 3 -0.286477 [3, 5, 6]
5 20 3 -0.565875 [1, 3, 5]
0%| | 0/3 [00:00<?, ?it/s] 33%|███▎ | RSI order 3: 1/3 [00:00<00:01, 1.88it/s] 67%|██████▋ | RSI order 4: 2/3 [00:00<00:00, 2.56it/s] 100%|██████████| RSI order 5: 3/3 [00:01<00:00, 2.73it/s] index order hoi multiplet
0 23 3 0.004256 [1, 4, 6]
1 12 3 0.002832 [0, 4, 5]
2 2 3 0.002819 [0, 1, 4]
3 21 3 -0.227325 [1, 3, 6]
4 15 3 -0.227350 [1, 2, 3]
5 20 3 -0.501178 [1, 3, 5]



Expand Down Expand Up @@ -166,13 +166,13 @@ single column). However, it's possible to simulate a multivariate variable.

.. code-block:: none
0%| | 0/3 [00:00<?, ?it/s] 33%|███▎ | RSI order 3: 1/3 [00:00<00:00, 2.15it/s] 67%|██████▋ | RSI order 4: 2/3 [00:00<00:00, 2.85it/s] 100%|██████████| RSI order 5: 3/3 [00:00<00:00, 3.18it/s] index order hoi multiplet
0 9 3 0.012057 [0, 3, 4]
1 2 3 0.009768 [0, 1, 4]
2 12 3 0.005461 [0, 4, 5]
3 29 3 -0.214735 [2, 4, 6]
4 20 3 -0.378104 [1, 3, 5]
5 8 3 -0.426096 [0, 2, 6]
0%| | 0/3 [00:00<?, ?it/s] 33%|███▎ | RSI order 3: 1/3 [00:00<00:00, 2.64it/s] 67%|██████▋ | RSI order 4: 2/3 [00:00<00:00, 3.50it/s] 100%|██████████| RSI order 5: 3/3 [00:00<00:00, 3.89it/s] index order hoi multiplet
0 2 3 0.011099 [0, 1, 4]
1 12 3 0.007764 [0, 4, 5]
2 23 3 0.005254 [1, 4, 6]
3 17 3 -0.316380 [1, 2, 5]
4 8 3 -0.595771 [0, 2, 6]
5 20 3 -0.636246 [1, 3, 5]



Expand Down Expand Up @@ -217,13 +217,13 @@ variable by knowing the subset of X.

.. code-block:: none
0%| | 0/3 [00:00<?, ?it/s] 33%|███▎ | RSI order 3: 1/3 [00:00<00:00, 2.76it/s] 67%|██████▋ | RSI order 4: 2/3 [00:00<00:00, 3.67it/s] 100%|██████████| RSI order 5: 3/3 [00:00<00:00, 4.12it/s] index order hoi multiplet
0 10 3 1.402145 [0, 3, 5]
1 26 3 0.267830 [2, 3, 5]
2 33 3 0.263248 [3, 5, 6]
3 24 3 -0.003083 [1, 5, 6]
4 17 3 -0.003613 [1, 2, 5]
5 22 3 -0.004108 [1, 4, 5]
0%| | 0/3 [00:00<?, ?it/s] 33%|███▎ | RSI order 3: 1/3 [00:00<00:00, 3.37it/s] 67%|██████▋ | RSI order 4: 2/3 [00:00<00:00, 4.47it/s] 100%|██████████| RSI order 5: 3/3 [00:00<00:00, 5.00it/s] index order hoi multiplet
0 10 3 1.323959 [0, 3, 5]
1 12 3 0.223727 [0, 4, 5]
2 3 3 0.223245 [0, 1, 5]
3 15 3 -0.001644 [1, 2, 3]
4 28 3 -0.002485 [2, 4, 5]
5 17 3 -0.005086 [1, 2, 5]



Expand Down Expand Up @@ -260,13 +260,13 @@ same for multivariate synergy

.. code-block:: none
0%| | 0/3 [00:00<?, ?it/s] 33%|███▎ | RSI order 3: 1/3 [00:00<00:00, 2.38it/s] 67%|██████▋ | RSI order 4: 2/3 [00:00<00:00, 3.19it/s] 100%|██████████| RSI order 5: 3/3 [00:00<00:00, 3.59it/s] index order hoi multiplet
0 18 3 1.447543 [1, 2, 6]
1 10 3 1.344808 [0, 3, 5]
2 0 3 0.242070 [0, 1, 2]
3 34 3 -0.008403 [4, 5, 6]
4 28 3 -0.008716 [2, 4, 5]
5 25 3 -0.014712 [2, 3, 4]
0%| | 0/3 [00:00<?, ?it/s] 33%|███▎ | RSI order 3: 1/3 [00:00<00:00, 2.92it/s] 67%|██████▋ | RSI order 4: 2/3 [00:00<00:00, 3.92it/s] 100%|██████████| RSI order 5: 3/3 [00:00<00:00, 4.41it/s] index order hoi multiplet
0 18 3 1.532814 [1, 2, 6]
1 10 3 1.216380 [0, 3, 5]
2 7 3 0.240971 [0, 2, 5]
3 22 3 -0.002237 [1, 4, 5]
4 19 3 -0.004306 [1, 3, 4]
5 2 3 -0.005537 [0, 1, 4]



Expand Down Expand Up @@ -323,23 +323,23 @@ Combining redundancy and synergy

.. code-block:: none
0%| | 0/3 [00:00<?, ?it/s] 33%|███▎ | RSI order 3: 1/3 [00:00<00:00, 2.30it/s] 67%|██████▋ | RSI order 4: 2/3 [00:00<00:00, 3.13it/s] 100%|██████████| RSI order 5: 3/3 [00:00<00:00, 3.55it/s] index order hoi multiplet
0 0 3 1.692653 [0, 1, 2]
1 6 3 0.273629 [0, 2, 4]
2 8 3 0.251986 [0, 2, 6]
3 20 3 -0.286211 [1, 3, 5]
4 33 3 -0.288871 [3, 5, 6]
5 31 3 -0.615239 [3, 4, 5]
0%| | 0/3 [00:00<?, ?it/s] 33%|███▎ | RSI order 3: 1/3 [00:00<00:00, 2.81it/s] 67%|██████▋ | RSI order 4: 2/3 [00:00<00:00, 3.82it/s] 100%|██████████| RSI order 5: 3/3 [00:00<00:00, 4.32it/s] index order hoi multiplet
0 0 3 1.304911 [0, 1, 2]
1 6 3 0.236754 [0, 2, 4]
2 8 3 0.236713 [0, 2, 6]
3 32 3 -0.241070 [3, 4, 6]
4 19 3 -0.257558 [1, 3, 4]
5 31 3 -0.449335 [3, 4, 5]





.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 5.697 seconds)
**Total running time of the script:** (0 minutes 4.735 seconds)

**Estimated memory usage:** 53 MB
**Estimated memory usage:** 51 MB


.. _sphx_glr_download_auto_examples_metrics_plot_rsi.py:
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6 changes: 3 additions & 3 deletions _sources/auto_examples/metrics/sg_execution_times.rst.txt
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Expand Up @@ -6,12 +6,12 @@

Computation times
=================
**00:10.014** total execution time for **auto_examples_metrics** files:
**00:08.136** total execution time for **auto_examples_metrics** files:

+-------------------------------------------------------------------------+-----------+----------+
| :ref:`sphx_glr_auto_examples_metrics_plot_rsi.py` (``plot_rsi.py``) | 00:05.697 | 52.8 MB |
| :ref:`sphx_glr_auto_examples_metrics_plot_rsi.py` (``plot_rsi.py``) | 00:04.735 | 51.2 MB |
+-------------------------------------------------------------------------+-----------+----------+
| :ref:`sphx_glr_auto_examples_metrics_plot_oinfo.py` (``plot_oinfo.py``) | 00:04.318 | 135.0 MB |
| :ref:`sphx_glr_auto_examples_metrics_plot_oinfo.py` (``plot_oinfo.py``) | 00:03.401 | 134.5 MB |
+-------------------------------------------------------------------------+-----------+----------+
| :ref:`sphx_glr_auto_examples_metrics_metrics2.py` (``metrics2.py``) | 00:00.000 | 0.0 MB |
+-------------------------------------------------------------------------+-----------+----------+
13 changes: 9 additions & 4 deletions _sources/index.rst.txt
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.. HOI documentation master file, created by
sphinx-quickstart on Sat Jul 8 09:12:38 2023.
You can adapt this file completely to your liking, but it should at least
contain the root `toctree` directive.
.. -*- mode: rst -*-
|Black|_ |Codecov|_

.. |Black| image:: https://img.shields.io/badge/code%20style-black-000000.svg
.. _Black: https://github.com/psf/black

.. |Codecov| image:: https://codecov.io/gh/brainets/hoi/graph/badge.svg?token=7PNM2VD994
.. _Codecov: https://codecov.io/gh/brainets/hoi

HOI jax implementation
======================
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