Convert issues to project pages, yay! (#70)

Co-authored-by: Remi-Gau <Remi-Gau@users.noreply.github.com>
brainhackorg · Dec 1, 2023 · 4a4647a · 4a4647a
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+{
+  "Title": "NARPS Open Pipelines - A codebase to study variability of fMRI analysis workflows",
+  "link_to_issue": "https://github.com/brainhackorg/global2023/issues/67",
+  "issue_number": 67,
+  "labels": [
+    {
+      "name": "git_skills:1_commit_push",
+      "description": "",
+      "color": "5B6C2C"
+    },
+    {
+      "name": "git_skills:2_branches_PRs",
+      "description": "",
+      "color": "5B6C2C"
+    },
+    {
+      "name": "modality:fMRI",
+      "description": "",
+      "color": "20CF02"
+    },
+    {
+      "name": "modality:MRI",
+      "description": "",
+      "color": "20CF02"
+    },
+    {
+      "name": "programming:documentation",
+      "description": "",
+      "color": "347C53"
+    },
+    {
+      "name": "programming:Python",
+      "description": "",
+      "color": "347C53"
+    },
+    {
+      "name": "project_type:documentation",
+      "description": null,
+      "color": "ededed"
+    },
+    {
+      "name": "tools:BIDS",
+      "description": "",
+      "color": "EA1D4E"
+    },
+    {
+      "name": "topic:reproducible_scientific_methods",
+      "description": null,
+      "color": "ededed"
+    },
+    {
+      "name": "project_type:pipeline_development",
+      "description": null,
+      "color": "ededed"
+    },
+    {
+      "name": "git_skills:0_none",
+      "description": "",
+      "color": "5B6C2C"
+    },
+    {
+      "name": "project_development_status:1_basic structure",
+      "description": null,
+      "color": "ededed"
+    },
+    {
+      "name": "status:web_ready",
+      "description": "",
+      "color": "0E8A16"
+    },
+    {
+      "name": "topic:statistical_modelling",
+      "description": null,
+      "color": "ededed"
+    },
+    {
+      "name": "tools:AFNI",
+      "description": null,
+      "color": "ededed"
+    },
+    {
+      "name": "tools:ANTs",
+      "description": null,
+      "color": "ededed"
+    },
+    {
+      "name": "tools:fMRIPrep",
+      "description": null,
+      "color": "ededed"
+    },
+    {
+      "name": "tools:FSL",
+      "description": null,
+      "color": "ededed"
+    },
+    {
+      "name": "tools:Nipype",
+      "description": null,
+      "color": "ededed"
+    },
+    {
+      "name": "tools:SPM",
+      "description": null,
+      "color": "ededed"
+    },
+    {
+      "name": "tools:Datalad",
+      "description": null,
+      "color": "ededed"
+    }
+  ],
+  "content": "### Title\n\nNARPS Open Pipelines\n\n### Leaders\n\nBoris Cl\u00e9net - R&D Engineer, Empenn Team, INRIA Rennes, France\r\nMattermost : [@bclenet](https://mattermost.brainhack.org/brainhack/messages/@bclenet)\n\n### Collaborators\n\nThis project is developed in the [Empenn team](https://team.inria.fr/empenn/) by Boris Cl\u00e9net, Elodie Germani, J\u00e9r\u00e9my Lefort-Besnard and Camille Maumet with contributions by R\u00e9mi Gau.\r\n\r\nAll project contributors are listed in the [Credits](https://github.com/Inria-Empenn/narps_open_pipelines#credits) section of the project !\n\n### Brainhack Global 2023 Event\n\nBrainhack Marseille\n\n### Project Description\n\nThe goal of the NARPS Open Pipelines project is to create a codebase reproducing the 70 pipelines of the NARPS study (Botvinik-Nezer et al., 2020) and share this as an open resource for the community.\r\n\r\nWe hope this tools will help analysing and understanding variability of fMRI analysis workflows, hence participating in the reproducible research movement.\r\n\r\nFind relevant information about how to get started is in the [README.md](https://github.com/Inria-Empenn/narps_open_pipelines#readme) file.\r\n\r\nJoin us and contribute to an open-source tool for the community !\r\n\n\n### Link to project repository/sources\n\nhttps://github.com/Inria-Empenn/narps_open_pipelines\n\n### Goals for Brainhack Global\n\n- start new pipeline reproductions\r\n- contribute to already stared pipelines\r\n- proof read the documentation\r\n- contribute to the documentation\r\n- write tests for existing pipelines\r\n\n\n### Good first issues\n\n- Contribute to the documentation (give feedback, help organizing)\r\n- Write the pseudo-code for a pipeline\r\n- Debug already implemented pipelines\r\n\r\n\n\n### Communication channels\n\n[Mattermost channel](https://mattermost.brainhack.org/brainhack/channels/narps-open-pipelines)\n\n### Skills\n\n- fMRI statistical analysis: advanced\r\n- python (+ nipype): advanced\r\n- writing and organizing documentation: basic\r\n\n\n### Onboarding documentation\n\nGeneral information can be found here: [README file](https://github.com/Inria-Empenn/narps_open_pipelines/blob/main/README.md)\r\nHow to contribute: [CONTRIBUTING file](https://github.com/Inria-Empenn/narps_open_pipelines/blob/main/CONTRIBUTING.md)\n\n### What will participants learn?\n\n- using the nipype python library\r\n- lots of fMRI analysis workflow examples\r\n- good practices for (python) coding\r\n\n\n### Data to use\n\nAlthough it may not be useful during the brainhack, the project's documentation (see [corresponding section](https://github.com/Inria-Empenn/narps_open_pipelines/blob/main/docs/data.md)) gives information about required data.\n\n### Number of collaborators\n\n4\n\n### Credit to collaborators\n\nAll project contributors are listed in the [Credits](https://github.com/Inria-Empenn/narps_open_pipelines#credits) section of the project.\n\n### Image\n\n[Link to the image here.](https://github.com/Inria-Empenn/narps_open_pipelines/blob/main/assets/images/project_illustration.png)\n\n### Type\n\ndocumentation, pipeline_development\n\n### Development status\n\n1_basic structure\n\n### Topic\n\nreproducible_scientific_methods, statistical_modelling\n\n### Tools\n\nAFNI, ANTs, BIDS, Datalad, fMRIPrep, FSL, Nipype, SPM\n\n### Programming language\n\ndocumentation, Python\n\n### Modalities\n\nfMRI\n\n### Git skills\n\n0_no_git_skills, 1_commit_push, 2_branches_PRs\n\n### Anything else?\n\n_No response_\n\n### Things to do after the project is submitted and ready to review.\n\n- [X] Add a comment below the main post of your issue saying: `Hi @brainhackorg/project-monitors my project is ready!`\n- [X] Twitter-sized summary of your project pitch.",
+  "project_url": "https://github.com/Inria-Empenn/narps_open_pipelines",
+  "project_description": "\n\nThe goal of the NARPS Open Pipelines project is to create a codebase reproducing the 70 pipelines of the NARPS study (Botvinik-Nezer et al., 2020) and share this as an open resource for the community.\r\n\r\nWe hope this tools will help analysing and understanding variability of fMRI analysis workflows, hence participating in the reproducible research movement.\r\n\r\nFind relevant information about how to get started is in the [README.md](https://github.com/Inria-Empenn/narps_open_pipelines"
+}