Adjust conf.py/html_context to work online (not local)

breimanntools · Sep 19, 2023 · daf4c9e · daf4c9e
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diff --git a/docs/build/doctrees/environment.pickle b/docs/build/doctrees/environment.pickle
diff --git a/docs/build/html/.buildinfo b/docs/build/html/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 0fcaab397ff162620b76774fcd12f333
+config: 58b28218296ef1ff785a2881fa4b8801
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/docs/build/html/_index/badges.html b/docs/build/html/_index/badges.html
@@ -95,7 +95,7 @@
       <li><a href="../index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">&lt;no title&gt;</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/_index/badges.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/_index/badges.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/_index/overview.html b/docs/build/html/_index/overview.html
@@ -95,7 +95,7 @@
       <li><a href="../index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">&lt;no title&gt;</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/_index/overview.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/_index/overview.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/_index/tables.html b/docs/build/html/_index/tables.html
@@ -102,7 +102,7 @@
       <li><a href="../index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">Tables</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/_index/tables.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/_index/tables.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/_index/usage_principles/data_loading.html b/docs/build/html/_index/usage_principles/data_loading.html
@@ -95,7 +95,7 @@
       <li><a href="../../index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">Data Loading</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/_index/usage_principles/data_loading.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/_index/usage_principles/data_loading.rst" class="fa fa-github"> Edit on GitHub</a>
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   </ul>
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diff --git a/docs/build/html/api.html b/docs/build/html/api.html
@@ -125,7 +125,7 @@
       <li><a href="index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">API</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/api.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/api.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.AAclust.html b/docs/build/html/generated/aaanalysis.AAclust.html
@@ -110,7 +110,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.AAclust</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.AAclust.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.AAclust.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.CPP.html b/docs/build/html/generated/aaanalysis.CPP.html
@@ -110,7 +110,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.CPP</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.CPP.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.CPP.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.CPPPlot.html b/docs/build/html/generated/aaanalysis.CPPPlot.html
@@ -110,7 +110,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.CPPPlot</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.CPPPlot.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.CPPPlot.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.SequenceFeature.html b/docs/build/html/generated/aaanalysis.SequenceFeature.html
@@ -110,7 +110,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.SequenceFeature</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.SequenceFeature.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.SequenceFeature.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.dPULearn.html b/docs/build/html/generated/aaanalysis.dPULearn.html
@@ -107,7 +107,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.dPULearn</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.dPULearn.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.dPULearn.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.load_dataset.html b/docs/build/html/generated/aaanalysis.load_dataset.html
@@ -108,7 +108,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.load_dataset</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.load_dataset.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.load_dataset.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.load_scales.html b/docs/build/html/generated/aaanalysis.load_scales.html
@@ -108,7 +108,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.load_scales</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.load_scales.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.load_scales.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.plot_gcfs.html b/docs/build/html/generated/aaanalysis.plot_gcfs.html
@@ -111,7 +111,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.plot_gcfs</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.plot_gcfs.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.plot_gcfs.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.plot_get_cdict.html b/docs/build/html/generated/aaanalysis.plot_get_cdict.html
@@ -111,7 +111,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.plot_get_cdict</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.plot_get_cdict.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.plot_get_cdict.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.plot_get_cmap.html b/docs/build/html/generated/aaanalysis.plot_get_cmap.html
@@ -111,7 +111,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.plot_get_cmap</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.plot_get_cmap.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.plot_get_cmap.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.plot_set_legend.html b/docs/build/html/generated/aaanalysis.plot_set_legend.html
@@ -111,7 +111,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.plot_set_legend</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.plot_set_legend.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.plot_set_legend.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/generated/aaanalysis.plot_settings.html b/docs/build/html/generated/aaanalysis.plot_settings.html
@@ -111,7 +111,7 @@
           <li class="breadcrumb-item"><a href="../api.html">API</a></li>
       <li class="breadcrumb-item active">aaanalysis.plot_settings</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/generated/aaanalysis.plot_settings.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/generated/aaanalysis.plot_settings.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/genindex.html b/docs/build/html/genindex.html
@@ -84,7 +84,7 @@
       <li><a href="index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">Index</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/genindex" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/genindex" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/index.html b/docs/build/html/index.html
@@ -96,7 +96,7 @@
       <li><a href="#" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">Welcome to the AAanalysis documentation</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/index.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/index.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/index/CONTRIBUTING_COPY.html b/docs/build/html/index/CONTRIBUTING_COPY.html
@@ -123,7 +123,7 @@
       <li><a href="../index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">Contributing</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/index/CONTRIBUTING_COPY.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/index/CONTRIBUTING_COPY.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/index/citations.html b/docs/build/html/index/citations.html
@@ -95,7 +95,7 @@
       <li><a href="../index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">&lt;no title&gt;</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/index/citations.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/index/citations.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/index/introduction.html b/docs/build/html/index/introduction.html
@@ -100,7 +100,7 @@
       <li><a href="../index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">Introduction</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/index/introduction.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/index/introduction.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/index/references.html b/docs/build/html/index/references.html
@@ -102,7 +102,7 @@
       <li><a href="../index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">References</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/index/references.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/index/references.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/index/tables_template.html b/docs/build/html/index/tables_template.html
@@ -95,7 +95,7 @@
       <li><a href="../index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">Tables</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/index/tables_template.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/index/tables_template.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/index/usage_principles.html b/docs/build/html/index/usage_principles.html
@@ -97,7 +97,7 @@
       <li><a href="../index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">Usage Principles</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/index/usage_principles.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/index/usage_principles.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/build/html/tutorials.html b/docs/build/html/tutorials.html
@@ -104,7 +104,7 @@
       <li><a href="index.html" class="icon icon-home"></a></li>
       <li class="breadcrumb-item active">Tutorials</li>
       <li class="wy-breadcrumbs-aside">
-              <a href="https://github.com/breimanntools/aaanalysis/blob/tutorials.rst" class="fa fa-github"> Edit on GitHub</a>
+              <a href="https://github.com/breimanntools/aaanalysis/blob/master/docs/source/tutorials.rst" class="fa fa-github"> Edit on GitHub</a>
       </li>
   </ul>
   <hr/>

diff --git a/docs/source/conf.py b/docs/source/conf.py
@@ -150,6 +150,7 @@
     'display_github': True,  # Add the 'Edit on GitHub' link
     'github_user': 'breimanntools',
     'github_repo': 'aaanalysis',
+    'github_version': 'master/docs/source/',
 }