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Description
As mentioned in the config file, where can I download the reference genome for mm10? I have seen similar posts asked by multiple people, and they are still open. Can anyone help or guide us on the steps to get these files?
chrom_sizes: "reference/hg38/GRCh38_EBV.no_alt.chrom.sizes.tsv"
regions_blocklist: "reference/hg38/GRCh38_unified_blacklist.bed"
ubiquitous_genes: "reference/UbiquitouslyExpressedGenes.txt"
genes: "reference/hg38/CollapsedGeneBounds.hg38.bed"
genome_tss: "reference/hg38/CollapsedGeneBounds.hg38.TSS500bp.bed"
qnorm: "reference/EnhancersQNormRef.K562.txt"
abc_thresholds: "reference/abc_thresholds.tsv"