Build and Test GATK 4 #4642

Job	Run time
build and push gatk docker to artifacts	17m 16s
Validate generated WDLs using womtools	13m 59s
Validate script WDLs using womtools	31s
check if the environment has privileges	1s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	23m 58s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	26m 13s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	24m 56s
WDL test RUN_M2_WDL on cromwell	16m 58s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	12m 38s
Java 17.0.6+10 build and test cloud	17m 31s
Java 17.0.6+10 build and test integration	34m 20s
Java 17.0.6+10 build and test unit	20m 21s
Java 17.0.6+10 test on docker integration	38m 23s
Java 17.0.6+10 test on docker unit	22m 21s
Java 17.0.6+10 test on docker variantcalling	31m 53s
Java 17.0.6+10 test on docker conda	25m 36s
	5h 26m 55s

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