Create tools for SV VCF cleaning #4756

Job	Run time
Validate generated WDLs using womtools	14m 14s
build and push gatk docker to artifacts	17m 26s
check if the environment has privileges	1s
Validate script WDLs using womtools	53s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	27m 5s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	27m 12s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	25m 8s
WDL test RUN_M2_WDL on cromwell	17m 18s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	13m 28s
Java 17.0.6+10 build and test cloud	14m 33s
Java 17.0.6+10 build and test integration	30m 8s
Java 17.0.6+10 build and test unit	19m 50s
Java 17.0.6+10 test on docker integration	35m 30s
Java 17.0.6+10 test on docker unit	22m 18s
Java 17.0.6+10 test on docker variantcalling	32m 28s
Java 17.0.6+10 test on docker conda	26m 14s
	5h 23m 46s

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