Skip to content

Commit

Permalink
Update documentation to point to Google doc describing deliverables f…
Browse files Browse the repository at this point in the history
…or the Echo callset.
  • Loading branch information
gbggrant committed Sep 4, 2024
1 parent 5a160ec commit 1c22248
Showing 1 changed file with 4 additions and 3 deletions.
7 changes: 4 additions & 3 deletions scripts/variantstore/docs/aou/AOU_DELIVERABLES.md
Original file line number Diff line number Diff line change
Expand Up @@ -103,9 +103,10 @@ The pipeline takes in the VDS and outputs a variant annotations table in BigQuer

Once the VAT table and a tsv is exported, the AoU research workbench team should be notified of its creation and permission should be granted so that several members of the team have view permission.

- Grant `BigQuery Data Viewer` permission to specific people's PMI-OPS accounts. This will include members of the AoU research workbench team. Check with your product manager for details.
- Copy the bgzipped, tarred export of the VAT into the pre-delivery bucket. For the Echo release, it was copied to `gs://prod-drc-broad/v8/wgs/vat/aou_srwgs_short_variants_v8r1.vat.bgz.tsv.gz`
- Finally, an email should be sent out notifying the AoU research workbench team of the readiness of the VAT. For echo, the email had the subject line: `Variant Annotations Table delivered for v8 srWGS joint callset` (it may just be easiest to find that email and modify it accordingly for the release you are working on).
- Grant `BigQuery Data Viewer` permission to specific people's PMI-OPS accounts. This will include members of the AoU research workbench team.
- Copy the bgzipped, tarred export of the VAT into the pre-delivery bucket.
- Finally, an email should be sent out notifying the AoU research workbench team of the readiness of the VAT.
- A document describing how this information was shared (for previous callsets) is located [here](https://docs.google.com/document/d/1caqgCS1b_dDJXQT4L-tRxjOkLGDgRNkO9eac1xd9ib0/edit)

## Additional Deliverables

Expand Down

0 comments on commit 1c22248

Please sign in to comment.