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Updates per code review feedback.
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gbggrant committed Aug 30, 2024
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11 changes: 2 additions & 9 deletions scripts/variantstore/docs/aou/AOU_DELIVERABLES.md
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Expand Up @@ -103,16 +103,9 @@ The pipeline takes in the VDS and outputs a variant annotations table in BigQuer

Once the VAT table and a tsv is exported, the AoU research workbench team should be notified of its creation and permission should be granted so that several members of the team have view permission.

- Grant `BigQuery Data Viewer` permission to specific people's PMI-OPS accounts. As of the Echo release, these accounts were:
<ul>
<li>kevin.levy@pmi-ops.org</li>
<li>srushti.gangireddy@pmi-ops.org</li>
<li>brian.freeman@pmi-ops.org </li>
<li>tarek.ahmed@pmi-ops.org</li>
<li>jennifer.zhang@pmi-ops.org</li>
</ul>
- Grant `BigQuery Data Viewer` permission to specific people's PMI-OPS accounts. This will include members of the AoU research workbench team. Check with your product manager for details.
- Copy the bgzipped, tarred export of the VAT into the pre-delivery bucket. For the Echo release, it was copied to `gs://prod-drc-broad/v8/wgs/vat/aou_srwgs_short_variants_v8r1.vat.bgz.tsv.gz`
- Finally, an email should be sent out notifying the AoU research workbench team (and others) of the readiness of the VAT. For echo, the email had the subject line: `Variant Annotations Table delivered for v8 srWGS joint callset` (it may just be easiest to find that email and modify it accordingly for the release you are working on.)
- Finally, an email should be sent out notifying the AoU research workbench team of the readiness of the VAT. For echo, the email had the subject line: `Variant Annotations Table delivered for v8 srWGS joint callset` (it may just be easiest to find that email and modify it accordingly for the release you are working on).

## Additional Deliverables

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