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Pull requests: broadinstitute/gnomad_methods

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Pull requests list

temporary methylation readme Constraint v4.1.1
#807 opened Sep 25, 2025 by jkgoodrich Loading…
@jkgoodrich
3
Update GA4GH VRS from 0.8.4 to 2.0.1 Changelog: new feature
#797 opened Aug 4, 2025 by mike-w-wilson Loading…
@mike-w-wilson
Add function for exploding intervals to loci Changelog: new feature
#789 opened Jul 3, 2025 by Ruchit10 Loading…
29
Implement Kyle's code for p_de_novo
#771 opened Mar 18, 2025 by KoalaQin • Draft
@KoalaQin
Add get_loftee_end_trunc_filter_expr and update_loftee_end_trunc_filter to patch the LOFTEE END_TRUNC filter Changelog: new feature
#740 opened Nov 28, 2024 by jkgoodrich Loading…
@klaricch @jkgoodrich
8
Add filter_meta_array and change filter_arrays_by_meta to support more complex items_to_filter parameters by using filter_meta_array Changelog: new feature
#725 opened Aug 19, 2024 by jkgoodrich Loading…
@klaricch @jkgoodrich
32
Deprecate get_most_severe_consequence_for_summary in favor of more flexible get_most_severe_csq_from_multiple_csq_lists Changelog: new feature
#714 opened Jun 25, 2024 by jkgoodrich Loading…
@klaricch @jkgoodrich
27
Initial upload of VQSR workflow Variant QC
#470 opened Jul 22, 2022 by LindoNkambule • Draft
@jkgoodrich
13
Fix ref_allele_mismatch in liftover_expr for indel variants
#273 opened Nov 18, 2020 by mkanai • Draft
3
ProTip! What’s not been updated in a month: updated:<2025-08-29.