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Update Dockerfile to checkout to aa-distbwa branch
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aawdeh authored Jan 19, 2024
1 parent 2a6b34e commit c54a341
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3 changes: 3 additions & 0 deletions 3rd-party-tools/samtools-dist-bwa/Dockerfile
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@@ -20,6 +20,9 @@ RUN set -eux; \
cd temp; \
# clone fork of Open-Omics-Acceleration-Framework with changes added for input/output
git clone --recursive https://github.com/IntelLabs/Open-Omics-Acceleration-Framework.git; \
# for testing purposes checkout to branch
cd Open-Omics-Acceleration-Framework; \
git checkout aa-distbwa; \

# install packages
cd Open-Omics-Acceleration-Framework/pipelines/fq2sortedbam; \

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