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2 changes: 1 addition & 1 deletion github_projects.rst
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Expand Up @@ -34,7 +34,7 @@ Adaptors for content exchange with community projects (SeqWIKI, BioConductor, Bi

edamMap
-------
https://https://github.com/edamontology/edammap
https://github.com/edamontology/edammap

Mapping terms and text to EDAM concepts.

6 changes: 4 additions & 2 deletions publications.rst
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Expand Up @@ -16,12 +16,14 @@ EDAM
----
If you use EDAM or its part, please reference:

Ison, J., Kalaš, M., Jonassen, I., Bolser, D., Uludag, M., McWilliam, H., Malone, J., Lopez, R., Pettifer, S. and Rice, P. (2013). `EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats <http://bioinformatics.oxfordjournals.org/content/29/10/1325.full>`_ *Bioinformatics*, *29*(10): 1325-1332.
Ison, J., Kalaš, M., Jonassen, I., Bolser, D., Uludag, M., McWilliam, H., Malone, J., Lopez, R., Pettifer, S. and Rice, P. (2013). `EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats <http://bioinformatics.oxfordjournals.org/content/29/10/1325.full>`_ *Bioinformatics*, *29*(10): 1325-1332.

doi: `10.1093/bioinformatics/btt113 <http://doi.org/10.1093/bioinformatics/btt113>`_ PMID: `23479348 <http://www.ncbi.nlm.nih.gov/pubmed/23479348>`_

This article is freely available (Open Access).

Workbench integration
---------------------
Ménager, H., Kalaš, M., Rapacki, K. and Ison, J. (2016). `Using registries to integrate bioinformatics tools and services into workbench environments` <https://link.springer.com/article/10.1007/s10009-015-0392-z>`_ *Int J Softw Tools Technol Transfer* 18: 581. doi:`10.1007/s10009-015-0392-z <http://doi.org/10.1007/s10009-015-0392-z>`_
Ménager, H., Kalaš, M., Rapacki, K. and Ison, J. (2016). `Using registries to integrate bioinformatics tools and services into workbench environments <https://link.springer.com/article/10.1007/s10009-015-0392-z>`_ *Int J Softw Tools Technol Transfer* 18: 581.

doi:`10.1007/s10009-015-0392-z <http://doi.org/10.1007/s10009-015-0392-z>`_