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fix python packages
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nr23730 authored Oct 7, 2024
1 parent 4eed0b1 commit 5ae6e2d
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3 changes: 2 additions & 1 deletion services/cbioportal/Dockerfile
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Expand Up @@ -72,7 +72,8 @@ COPY --from=build /cbioportal/src/main/resources/db-scripts /cbioportal/db-scrip

# install build and runtime dependencies
# ignore update failures
RUN pip3 install --break-system-packages -r /core/requirements.txt
RUN pip3 install --break-system-packages -r /core/requirements.txt
RUN pip3 install --break-system-packages --upgrade urllib3 requests

# add importer scripts to PATH for easy running in containers
RUN find /core/scripts/ -type f -executable \! -name '*.pl' -print0 | xargs -i -- ln -s {} /usr/local/bin
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