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@bzhanglab

Zhang Lab

Translating omics data into biological insights.

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  1. OmicsEV OmicsEV Public

    A tool for large scale omics datasets evaluation

    R 24 4

  2. WebGestaltR WebGestaltR Public

    R package for WebGestalt

    R 35 13

  3. sumer sumer Public

    SUmmarizing Multiple Enrichment analysis Results

    R 8 4

  4. neoflow neoflow Public

    NeoFlow: a proteogenomics pipeline for neoantigen discovery

    Nextflow 23 12

  5. NetSAM NetSAM Public

    Network Seriation And Modularization R package

    R 3 3

Repositories

Showing 10 of 45 repositories
  • webgestalt_tutorial Public

    Tutorial of how to start from abundance data to using WebGestalt for Enrichment Analysis

    bzhanglab/webgestalt_tutorial’s past year of commit activity
    R 0 0 0 0 Updated Mar 28, 2025
  • WebGestaltR Public

    R package for WebGestalt

    bzhanglab/WebGestaltR’s past year of commit activity
    R 35 13 16 1 Updated Mar 27, 2025
  • PepQueryMHC Public

    PepQueryMHC: Rapid and Comprehensive Tumor Antigen Prioritization from Immunopeptidomics Data

    bzhanglab/PepQueryMHC’s past year of commit activity
    Java 2 0 1 0 Updated Mar 26, 2025
  • webgestalt_rust Public

    Rust implementation of WebGestalt

    bzhanglab/webgestalt_rust’s past year of commit activity
    Rust 2 Apache-2.0 0 1 0 Updated Mar 5, 2025
  • CoPheeMap Public

    Co-regulation map of phosphosites

    bzhanglab/CoPheeMap’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Feb 28, 2025
  • funmap Public

    generate gene co-function networks using omics data

    bzhanglab/funmap’s past year of commit activity
    Python 6 MIT 3 1 1 Updated Jan 23, 2025
  • nf-docker Public

    docker files for pipeline steps

    bzhanglab/nf-docker’s past year of commit activity
    R 0 0 0 0 Updated Jan 2, 2025
  • neoflow Public

    NeoFlow: a proteogenomics pipeline for neoantigen discovery

    bzhanglab/neoflow’s past year of commit activity
    Nextflow 23 12 9 0 Updated Nov 16, 2024
  • sumer Public

    SUmmarizing Multiple Enrichment analysis Results

    bzhanglab/sumer’s past year of commit activity
    R 8 4 0 0 Updated Nov 14, 2024
  • DeepVEP Public
    bzhanglab/DeepVEP’s past year of commit activity
    Python 1 0 0 0 Updated Sep 12, 2024
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