Implement incremental upload of tab delimited data. #38

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forus wants to merge 27 commits intocBioPortal:rfc79from se4bio:inc-tab-delimited-uploader

+1,739-494

Commits on May 15, 2024

Commits on May 16, 2024

Reuse genetic_profile record if it exists in db already
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Test incremental upload of tab delim. data types from umbrella script
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Move counting lines if file inside generic assay patient level data uploader
forus
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Commits on May 17, 2024

Give error that generic asssay patient level data is not supported
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Clean sample_cna_event despite whether it has alteration_driver_annotation rows or not
forus
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Commits on May 28, 2024

Fix cbioportalImport script execution
forus
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