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ls: Argument list too long

Status: Open.

#22 In caleblareau/maegatk;

· amyruthvandiver opened on Dec 31, 2025

GroupReadsByUmi failed: Mate mapping quality (MQ) tag not present on read LH00308:381:22MV27LT4:6:1197:6962:1659

Status: Open.

#21 In caleblareau/maegatk;

· Joyjoyjoyc opened on Nov 26, 2025

maegatk output to mitochondria sequence

Status: Open.

#20 In caleblareau/maegatk;

· Ajaingithub opened on Apr 22, 2025

snakemake temp file location

Status: Open.

#18 In caleblareau/maegatk;

· yuuuuzhang opened on Aug 6, 2024

No coverage along the mitochondrial chromosome with published MAESTER data

Status: Open.

#12 In caleblareau/maegatk;

· smzt opened on Jul 26, 2023

No output and intermediate file

Status: Open.

#7 In caleblareau/maegatk;

· CHAOYiming opened on Oct 12, 2022

Error in checkGrep(grep(".A.txt", files)) when running maegatk

Status: Open.

#5 In caleblareau/maegatk;

· uqjlu8 opened on Mar 14, 2022

Container & documentation

Status: Open.

#3 In caleblareau/maegatk;

· Zethson opened on Oct 25, 2021