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fix #18
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tavareshugo committed Dec 8, 2023
1 parent 8ba6eac commit 1b26cb6
Showing 1 changed file with 5 additions and 5 deletions.
10 changes: 5 additions & 5 deletions setup.md
Original file line number Diff line number Diff line change
Expand Up @@ -295,7 +295,7 @@ You can follow the same instructions as for "Ubuntu".
The data used in these materials is provided as an archive file (`bacterial-genomics-data.tar`).
You can download it from the link below and extract the files from the archive into a directory of your choice.

<a href="https://www.dropbox.com/scl/fi/ixw6vi6332mpoxo6yizti/bacterial-genomics-data.tar?rlkey=usr0hgvhktysxmt9ju0m3kds0&dl=1">
<a href="https://www.dropbox.com/scl/fo/k2jyjgfsblfxjcktwlsmg/h?rlkey=6qov67ani513j2tom8pjl9ncm&dl=0">
<button class="btn"><i class="fa fa-download"></i> Download</button>
</a>

Expand All @@ -307,7 +307,7 @@ datadir="$HOME/Desktop/bacterial_genomics"

# download and extract to directory
mkdir $datadir
wget -O $datadir/bact-data.tar "https://www.dropbox.com/scl/fi/ixw6vi6332mpoxo6yizti/bacterial-genomics-data.tar?rlkey=usr0hgvhktysxmt9ju0m3kds0&dl=1"
wget -O $datadir/bact-data.tar "https://www.dropbox.com/scl/fi/ba1ws6jx045jjq96m4bum/bacterial-genomics-data.tar?rlkey=thssczgyl9n32gvtdjwi1673f&dl=1"
tar -xvf $datadir/bact-data.tar -C $datadir
rm $datadir/bact-data.tar
```
Expand All @@ -323,9 +323,9 @@ This is optional, you can download the databases where it is most convenient for
If you work in a research group, it's a good idea to have a shared storage where everyone can access the same copy of the databases.

```bash
# create directory for public resources
mkdir resources
cd resources
# create directory for public DBs
mkdir databases
cd databases
```

#### Kraken2
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