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Maybe this is an artifact of those limited dataset but we were already thinking on passing the video_file_path as an optional argument so I think this is yet another reason.
The text was updated successfully, but these errors were encountered:
Currently the corresponding video is determined in two steps. First, a stem is calculated here:
neuroconv/src/neuroconv/datainterfaces/behavior/deeplabcut/_dlc_utils.py
Line 182 in d1e3815
Then, the configuration file is used to find the videos in configuration that contain that stem:
neuroconv/src/neuroconv/datainterfaces/behavior/deeplabcut/_dlc_utils.py
Lines 211 to 214 in d1e3815
But, if we look at the test data that we had for a while the video set paths in the configuration look like this:
And the hdf5 file name looks like this:
m3v1mp4DLC_resnet50_openfieldAug20shuffle1_30000.h5
So the stem would be
m3v1mp4
but that is not to be found among that list.I just trained some data this afternoon myself and there is the same mismatch.
https://gin.g-node.org/CatalystNeuro/behavior_testing_data/pulls/13
Maybe this is an artifact of those limited dataset but we were already thinking on passing the video_file_path as an optional argument so I think this is yet another reason.
The text was updated successfully, but these errors were encountered: