fix si pipeline installation

catalystneuro · Jan 16, 2024 · 4c5bbcd · 4c5bbcd
1 parent 59d1997
commit 4c5bbcd
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Showing 2 changed files with 2 additions and 3 deletions.
diff --git a/si_kilosort25/Dockerfile b/si_kilosort25/Dockerfile
@@ -1,6 +1,5 @@
 FROM spikeinterface/kilosort2_5-compiled-base:0.2.0
 
-
 # Install Dendro from source, for now
 WORKDIR /src
 RUN git clone https://github.com/flatironinstitute/dendro.git && \
@@ -10,7 +9,7 @@ RUN git clone https://github.com/flatironinstitute/dendro.git && \
 # Install spikeinterface-pipelines from source, for now
 RUN git clone https://github.com/SpikeInterface/spikeinterface_pipelines.git && \
     cd spikeinterface_pipelines && \
-    git checkout dev && \
+    # git checkout dev && \
     pip install -e .
 
 # Install spikeinterface from source, for now

diff --git a/si_kilosort3/Dockerfile b/si_kilosort3/Dockerfile
@@ -9,7 +9,7 @@ RUN git clone https://github.com/flatironinstitute/dendro.git && \
 # Install spikeinterface-pipelines from source, for now
 RUN git clone https://github.com/SpikeInterface/spikeinterface_pipelines.git && \
     cd spikeinterface_pipelines && \
-    git checkout dev && \
+    # git checkout dev && \
     pip install -e .
 
 # Install spikeinterface from source, for now