latest v ms5 not working

catalystneuro · Apr 25, 2024 · 641c577 · 641c577
1 parent 4b2374a
commit 641c577
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diff --git a/si_mountainsort5/Dockerfile b/si_mountainsort5/Dockerfile
@@ -1,4 +1,4 @@
-FROM spikeinterface/mountainsort5-base:0.5.3
+FROM spikeinterface/mountainsort5-base:0.5.6
 
 # Copy files into the container
 WORKDIR /app
@@ -30,10 +30,9 @@ RUN git clone https://github.com/SpikeInterface/spikeinterface_pipelines.git &&
 #     pip install -e .
 
 # Install spikeinterface from source, for now
-RUN git clone https://github.com/alejoe91/spikeinterface && \
+RUN git clone https://github.com/SpikeInterface/spikeinterface && \
     cd spikeinterface && \
-    # git remote add alejoe91 https://github.com/alejoe91/spikeinterface && \
-    git checkout 0.100.5-ms5 && \
+    # git checkout 0.100.5-ms5 && \
     pip install -e .[full]
 
 # # Install mountainsort from source, for now

diff --git a/si_mountainsort5/requirements.txt b/si_mountainsort5/requirements.txt
@@ -1,7 +1,7 @@
 pynwb
 pyvips==2.2.2
-spikeinterface[full]==0.100.5
-mountainsort5==0.5.6
 neuroconv
+mountainsort5==0.5.6
+# spikeinterface[full]==0.100.5
 # spikeinterface_pipelines
-# dendro
+# dendro==0.2.14