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Removed one additional 'sample' that was read from block for ENVISAT IM #86

Removed one additional 'sample' that was read from block for ENVISAT IM

Removed one additional 'sample' that was read from block for ENVISAT IM #86

Workflow file for this run

name: End-to-end tests on AWS GPU instance
on:
pull_request:
branches: [ "main" ]
max-concurrency: 1
# Allows to run this workflow manually from the Actions tab
workflow_dispatch:
max-concurrency: 1
jobs:
start-gpu-instance:
name: Start GPU instance
runs-on: ubuntu-latest
outputs:
instance_ip: ${{ steps.trigger_instance.outputs.instance_ip }}
steps:
- name: Configure AWS credentials
uses: aws-actions/configure-aws-credentials@v4
with:
aws-access-key-id: ${{ secrets.FALCON_ACCESS_KEY_ID }}
aws-secret-access-key: ${{ secrets.FALCON_SECRET_ACCESS_KEY }}
aws-region: ${{ secrets.EAGLE_INSTANCE_REGION }}
- uses: actions/checkout@v4
- name: Trigger the instance
id: trigger_instance
run: |
set -o pipefail
$GITHUB_WORKSPACE/build-automation/trigger_ec2_instance.sh ${{ secrets.EAGLE_INSTANCE_ID }} | tee trigger_out.txt
ip_address=$(cat trigger_out.txt | tail -n 1)
echo "instance_ip=$ip_address" >> $GITHUB_OUTPUT
sleep 5
end-to-end-testing:
name: End-to-end testing
runs-on: ubuntu-latest
needs: start-gpu-instance
steps:
- uses: actions/checkout@v4
with:
submodules: 'recursive'
- name: Create SSH key
env:
SSH_PRIVATE_KEY: ${{ secrets.EAGLE_SSH_KEY }}
run: |
key_location=~/.ssh/
mkdir -p $key_location
key_path=$key_location/id_rsa
echo "$SSH_PRIVATE_KEY" > $key_path
sudo chmod 600 $key_path
ssh-keygen -f $key_path -y > $key_path.pub
- name: Transfer package and create e2e docker image
id: transfer_package
env:
INSTANCE_USERNAME: ${{ secrets.EAGLE_USERNAME }}
run: |
instance_ip=${{ needs.start-gpu-instance.outputs.instance_ip }}
rm -rf $GITHUB_WORKSPACE/.git
scp -o "StrictHostKeyChecking no" -r $GITHUB_WORKSPACE $INSTANCE_USERNAME@$instance_ip:/tmp/
ssh -o "StrictHostKeyChecking no" $INSTANCE_USERNAME@$instance_ip "CUDAARCHS=\"50;52\" CMAKE_BUILD_TYPE=Release /tmp/asar-focus/build-automation/create_exe_in_container.sh /tmp/asar-focus cgialus/alus-ootpa-devel-extra"
# To RAM disk
ssh -o "StrictHostKeyChecking no" $INSTANCE_USERNAME@$instance_ip "cp -r /home/$INSTANCE_USERNAME/e2e /dev/shm/"
- uses: actions/checkout@v4
- name: End-to-end tests
id: e2e-run
continue-on-error: true
env:
INSTANCE_USERNAME: ${{ secrets.EAGLE_USERNAME }}
ACCESS_KEY_ID: ${{ secrets.PALMY_ACCESS_KEY_ID }}
SECRET_ACCESS_KEY: ${{ secrets.PALMY_SECRET_ACCESS_KEY }}
run: |
instance_ip=${{ needs.start-gpu-instance.outputs.instance_ip }}
exe_image_name="alus-ootpa-devel-extra-asar-focus-exe"
# JFYI
exe_container_name="alus-ootpa-devel-extra-asar-focus-exe-e2e"
echo "[default]" > /tmp/cred
echo "aws_access_key_id=${ACCESS_KEY_ID}" >> /tmp/cred
echo "aws_secret_access_key=${SECRET_ACCESS_KEY}" >> /tmp/cred
scp -o "StrictHostKeyChecking no" /tmp/cred $INSTANCE_USERNAME@$instance_ip:/tmp/
ssh -o "StrictHostKeyChecking no" $INSTANCE_USERNAME@$instance_ip "/tmp/asar-focus/build-automation/run_e2e_container.sh /dev/shm/e2e $exe_image_name /tmp/cred"
- name: Stash assets from ramdisk
env:
INSTANCE_USERNAME: ${{ secrets.EAGLE_USERNAME }}
run: |
instance_ip=${{ needs.start-gpu-instance.outputs.instance_ip }}
ssh -o "StrictHostKeyChecking no" $INSTANCE_USERNAME@$instance_ip "sudo chown -R $INSTANCE_USERNAME:$INSTANCE_USERNAME /dev/shm/e2e"
ssh -o "StrictHostKeyChecking no" $INSTANCE_USERNAME@$instance_ip "rsync -av /dev/shm/e2e /home/$INSTANCE_USERNAME/"
ssh -o "StrictHostKeyChecking no" $INSTANCE_USERNAME@$instance_ip "rm -rf /dev/shm/e2e"
# This is needed because 'continue-on-error: true' for 'e2e-run' would not make this step failure in actions UI
- name: Report E2E run error
if: steps.e2e-run.outcome != 'success'
run: exit 1
stop-gpu-instance:
name: Stop GPU instance
runs-on: ubuntu-latest
needs: [start-gpu-instance, end-to-end-testing]
if: |
always() &&
needs.start-gpu-instance.result == 'success'
steps:
- name: Configure AWS Credentials
uses: aws-actions/configure-aws-credentials@v4
with:
aws-access-key-id: ${{ secrets.FALCON_ACCESS_KEY_ID }}
aws-secret-access-key: ${{ secrets.FALCON_SECRET_ACCESS_KEY }}
aws-region: ${{ secrets.EAGLE_INSTANCE_REGION }}
- uses: actions/checkout@v4
- name: Stop GPU instance
run: |
$GITHUB_WORKSPACE/build-automation/stop_ec2_instance.sh ${{ secrets.EAGLE_INSTANCE_ID }}