chore: Add jest unit testing

.github/workflows/conventional-commits.yml

@@ -12,4 +12,4 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v3
-      - uses: chanzuckerberg/github-actions/.github/actions/conventional-commits@v1.3.2
+      - uses: chanzuckerberg/github-actions/.github/actions/conventional-commits@main

.github/workflows/deploy-staging.yml

@@ -1,7 +1,6 @@
 on:
-  push:
-    branches:
-      - main
+  release:
+    types: [published]
 
 name: Deploy main to staging
 jobs:

.github/workflows/jest-unit-tests.yml

@@ -0,0 +1,27 @@
+name: Jest unit tests
+on: push
+
+jobs:
+  jest-unit-tests:
+    runs-on: [ARM64, self-hosted, Linux]
+    steps:
+      - name: Check out code
+        uses: actions/checkout@v3
+      - name: Install node
+        uses: actions/setup-node@v4
+        with:
+          node-version-file: '.node-version'
+      - name: Install system dependencies
+        run: |
+          sudo apt-get update
+          sudo apt-get install -y libcurl4-openssl-dev
+      - name: Build Docker image
+        run: |
+          make build
+      - name: Create Docker network
+        run: |
+          docker swarm init
+          docker network create czidnet --attachable --driver overlay
+      - name: Run tests in Docker container
+        run: |
+          make test

.meshrc.yaml

@@ -240,6 +240,10 @@ additionalResolvers:
 plugins:
   - csrfPrevention:
       requestHeaders: ['x-graphql-yoga-csrf']
+  - mock:
+      if: "process.env.MOCKING_ENABLED != null"
+      initializeStore: ./tests/mocks/CZIDMockStore#initializeStore
+      mocks: !includes meshrc-mocks
 serve:
   port: 4444
   endpoint: "/graphqlfed"

example-queries/zip-link-query.graphql

@@ -0,0 +1,6 @@
+query ZipLinkQuery($workflowRunId: String) {
+  ZipLink(workflowRunId: $workflowRunId) {
+    url
+    error
+  }
+}

jest.config.js

@@ -0,0 +1,5 @@
+/** @type {import('ts-jest').JestConfigWithTsJest} */
+module.exports = {
+  preset: "ts-jest",
+  testEnvironment: "node",
+};

json-schemas/amrWorkflowResults.json

@@ -1,7 +1,7 @@
 {
     "type": "object",
     "properties": {
-        "quality_metrics": {
+        "metric_amr": {
             "type": "object",
             "properties": {
                 "total_reads": {
@@ -33,7 +33,7 @@
                 }
             }
         },
-        "report_table_data": {
+        "amr_hit": {
             "type": "array",
             "items": {
                 "type": "object",

json-schemas/mngsWorkflowResults.json

@@ -104,7 +104,7 @@
                         "type": "object",
                         "properties": {
                             "tax_id": {
-                                "type": "integer"
+                                "type": "string"
                             },
                             "name": {
                                 "type": "string"

meshrc-mocks/zipLink.yml

@@ -0,0 +1,4 @@
+apply: Query.ZipLink
+store:
+  type: ZipLink
+  key: "{args.workflowRunId}"