CZ ID is a hypothesis-free global software platform that helps scientists identify pathogens in metagenomic sequencing data.
- Discover - Identify the pathogen landscape
- Detect - Monitor and review potential outbreaks
- Decipher - Find potential infecting organisms in large datasets
A collaborative open project of Chan Zuckerberg Initiative and Chan Zuckerberg Biohub.
Check out our repositories:
- czid-web - Frontend portal (here)
- czid-workflows - Bioinformatics workflows
- czid-cli - Command line upload interface
- czid-bench - Pipeline benchmarking tools
Check out our wiki for getting started with development in this repository and in CZ ID in general.