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feat: remove seurat [do not merge yet] #6746

feat: remove seurat [do not merge yet]

feat: remove seurat [do not merge yet] #6746

Triggered via pull request January 10, 2025 19:40
Status Failure
Total duration 45m 49s
Artifacts 13

rdev-update-for-pr.yml

on: pull_request
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get_previous_image_digests
Matrix: build_images / build_images
seed-wmg-cellguide-rdev
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seed-wmg-cellguide-rdev
summarize
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rdev-tests  /  seed-database-e2e-tests
24m 30s
rdev-tests / seed-database-e2e-tests
rdev-tests  /  functional-test
30m 14s
rdev-tests / functional-test
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14s
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Matrix: rdev-tests / run-e2e-tests
rdev-tests  /  e2e-logged-in-test
6m 9s
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rdev-tests  /  merge-playwright-reports
52s
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16 errors, 5 warnings, and 6 notices
[chromium] › tests/features/home/homePage.test.ts:39:7 › Homepage › Hero numbers are rendered: frontend/tests/features/home/homePage.test.ts#L54
1) [chromium] › tests/features/home/homePage.test.ts:39:7 › Homepage › Hero numbers are rendered ─ Error: tryUntil() failed - Maxed out retries of 50: expect(received).not.toEqual(expected) // deep equality Expected: not "33M+" 52 | .innerText(); 53 | > 54 | expect(cellsHeroNum).not.toEqual(LANDING_PAGE_FALLBACK_CELLS_HERO_NUM); | ^ 55 | expect(cellTypesHeroNum).not.toEqual( 56 | LANDING_PAGE_FALLBACK_CELLTYPES_HERO_NUM 57 | ); at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/home/homePage.test.ts:54:34) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/home/homePage.test.ts:42:5
[chromium] › tests/features/home/homePage.test.ts:39:7 › Homepage › Hero numbers are rendered: frontend/tests/features/home/homePage.test.ts#L54
1) [chromium] › tests/features/home/homePage.test.ts:39:7 › Homepage › Hero numbers are rendered ─ Retry #1 ─────────────────────────────────────────────────────────────────────────────────────── Error: tryUntil() failed - Maxed out retries of 50: expect(received).not.toEqual(expected) // deep equality Expected: not "33M+" 52 | .innerText(); 53 | > 54 | expect(cellsHeroNum).not.toEqual(LANDING_PAGE_FALLBACK_CELLS_HERO_NUM); | ^ 55 | expect(cellTypesHeroNum).not.toEqual( 56 | LANDING_PAGE_FALLBACK_CELLTYPES_HERO_NUM 57 | ); at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/home/homePage.test.ts:54:34) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/home/homePage.test.ts:42:5
[chromium] › tests/features/home/homePage.test.ts:39:7 › Homepage › Hero numbers are rendered: frontend/tests/features/home/homePage.test.ts#L54
1) [chromium] › tests/features/home/homePage.test.ts:39:7 › Homepage › Hero numbers are rendered ─ Retry #2 ─────────────────────────────────────────────────────────────────────────────────────── Error: tryUntil() failed - Maxed out retries of 50: expect(received).not.toEqual(expected) // deep equality Expected: not "33M+" 52 | .innerText(); 53 | > 54 | expect(cellsHeroNum).not.toEqual(LANDING_PAGE_FALLBACK_CELLS_HERO_NUM); | ^ 55 | expect(cellTypesHeroNum).not.toEqual( 56 | LANDING_PAGE_FALLBACK_CELLTYPES_HERO_NUM 57 | ); at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/home/homePage.test.ts:54:34) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/home/homePage.test.ts:42:5
rdev-tests / e2e-tests chromium 4 of 5
Process completed with exit code 1.
rdev-tests / functional-test
The job running on runner GitHub Actions 20 has exceeded the maximum execution time of 30 minutes.
rdev-tests / functional-test
The operation was canceled.
[chromium] › tests/features/collection/revision.test.ts:100:7 › Collection Revision @loggedIn › starts a revision: frontend/tests/features/collection/revision.test.ts#L565
1) [chromium] › tests/features/collection/revision.test.ts:100:7 › Collection Revision @loggedin › starts a revision Error: tryUntil() failed - Maxed out timeout of 60000ms: No available collection 563 | } 564 | > 565 | throw new Error("No available collection"); | ^ 566 | } 567 | }, 568 | { page, timeoutMs: WAIT_FOR_MIN_USABLE_COLLECTION_TIMEOUT_MS } at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:565:15) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at startRevision (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:537:3) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:102:28
[chromium] › tests/features/collection/revision.test.ts:100:7 › Collection Revision @loggedIn › starts a revision: frontend/tests/features/collection/revision.test.ts#L565
1) [chromium] › tests/features/collection/revision.test.ts:100:7 › Collection Revision @loggedin › starts a revision Retry #1 ─────────────────────────────────────────────────────────────────────────────────────── Error: tryUntil() failed - Maxed out timeout of 60000ms: No available collection 563 | } 564 | > 565 | throw new Error("No available collection"); | ^ 566 | } 567 | }, 568 | { page, timeoutMs: WAIT_FOR_MIN_USABLE_COLLECTION_TIMEOUT_MS } at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:565:15) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at startRevision (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:537:3) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:102:28
[chromium] › tests/features/collection/revision.test.ts:100:7 › Collection Revision @loggedIn › starts a revision: frontend/tests/features/collection/revision.test.ts#L565
1) [chromium] › tests/features/collection/revision.test.ts:100:7 › Collection Revision @loggedin › starts a revision Retry #2 ─────────────────────────────────────────────────────────────────────────────────────── Error: tryUntil() failed - Maxed out timeout of 60000ms: No available collection 563 | } 564 | > 565 | throw new Error("No available collection"); | ^ 566 | } 567 | }, 568 | { page, timeoutMs: WAIT_FOR_MIN_USABLE_COLLECTION_TIMEOUT_MS } at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:565:15) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at startRevision (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:537:3) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:102:28
[chromium] › tests/features/collection/revision.test.ts:43:7 › Collection Revision @loggedIn › enables publish if datasets updated: frontend/tests/features/collection/revision.test.ts#L565
2) [chromium] › tests/features/collection/revision.test.ts:43:7 › Collection Revision @loggedin › enables publish if datasets updated Error: tryUntil() failed - Maxed out timeout of 60000ms: No available collection 563 | } 564 | > 565 | throw new Error("No available collection"); | ^ 566 | } 567 | }, 568 | { page, timeoutMs: WAIT_FOR_MIN_USABLE_COLLECTION_TIMEOUT_MS } at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:565:15) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at startRevision (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:537:3) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:45:5
[chromium] › tests/features/collection/revision.test.ts:43:7 › Collection Revision @loggedIn › enables publish if datasets updated: frontend/tests/features/collection/revision.test.ts#L565
2) [chromium] › tests/features/collection/revision.test.ts:43:7 › Collection Revision @loggedin › enables publish if datasets updated Retry #1 ─────────────────────────────────────────────────────────────────────────────────────── Error: tryUntil() failed - Maxed out timeout of 60000ms: No available collection 563 | } 564 | > 565 | throw new Error("No available collection"); | ^ 566 | } 567 | }, 568 | { page, timeoutMs: WAIT_FOR_MIN_USABLE_COLLECTION_TIMEOUT_MS } at page.page (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:565:15) at tryUntil (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/utils/helpers.ts:165:7) at startRevision (/home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:537:3) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/collection/revision.test.ts:45:5
[chromium] › tests/features/collection/revision.test.ts:43:7 › Collection Revision @loggedIn › enables publish if datasets updated: frontend/tests/features/collection/revision.test.ts#L1
2) [chromium] › tests/features/collection/revision.test.ts:43:7 › Collection Revision @loggedin › enables publish if datasets updated Retry #2 ─────────────────────────────────────────────────────────────────────────────────────── Test was interrupted.
rdev-tests / e2e-logged-in-test
Process completed with exit code 1.
[chromium] › tests/features/cellGuide/cellGuide.test.ts:752:11 › Cell Guide › CellGuide Card › Ontology Viewer › Clicking on a cell type label opens its CellGuide info sidebar: frontend/tests/features/cellGuide/cellGuide.test.ts#L1
1) [chromium] › tests/features/cellGuide/cellGuide.test.ts:752:11 › Cell Guide › CellGuide Card › Ontology Viewer › Clicking on a cell type label opens its CellGuide info sidebar Test timeout of 300000ms exceeded.
[chromium] › tests/features/cellGuide/cellGuide.test.ts:752:11 › Cell Guide › CellGuide Card › Ontology Viewer › Clicking on a cell type label opens its CellGuide info sidebar: frontend/tests/features/cellGuide/cellGuide.test.ts#L763
1) [chromium] › tests/features/cellGuide/cellGuide.test.ts:752:11 › Cell Guide › CellGuide Card › Ontology Viewer › Clicking on a cell type label opens its CellGuide info sidebar Error: locator.click: Test timeout of 300000ms exceeded. Call log: - waiting for getByText('neuron associated cell', { exact: true }) 761 | .waitFor({ timeout: WAIT_FOR_TIMEOUT_MS }); 762 | > 763 | await page.getByText("neuron associated cell", { exact: true }).click(), | ^ 764 | await isElementVisible(page, CELLGUIDE_INFO_SIDEBAR_TEST_ID); 765 | await page 766 | .getByTestId(CELLGUIDE_VIEW_PAGE_SIDEBAR_BUTTON_TEST_ID) at /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/tests/features/cellGuide/cellGuide.test.ts:763:73
rdev-tests / e2e-test
Process completed with exit code 1.
rdev-tests / e2e-tests chromium 3 of 5
No files were found with the provided path: /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/playwright-report. No artifacts will be uploaded.
rdev-tests / e2e-tests chromium 2 of 5
No files were found with the provided path: /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/playwright-report. No artifacts will be uploaded.
rdev-tests / e2e-tests chromium 5 of 5
No files were found with the provided path: /home/runner/work/single-cell-data-portal/single-cell-data-portal/frontend/playwright-report. No artifacts will be uploaded.
rdev-tests / e2e-test
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
rdev-tests / merge-playwright-reports
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
🎭 Playwright Run Summary
1 skipped 59 passed (5.0s)
🎭 Playwright Run Summary
1 skipped 59 passed (1.3m)
🎭 Playwright Run Summary
1 failed [chromium] › tests/features/home/homePage.test.ts:39:7 › Homepage › Hero numbers are rendered ── 3 skipped 55 passed (3.6m)
🎭 Playwright Run Summary
1 failed [chromium] › tests/features/collection/revision.test.ts:100:7 › Collection Revision @loggedin › starts a revision 1 flaky [chromium] › tests/features/collection/revision.test.ts:43:7 › Collection Revision @loggedin › enables publish if datasets updated 9 did not run 6 passed (4.5m)
🎭 Playwright Run Summary
4 skipped 55 passed (5.2m)
🎭 Playwright Run Summary
1 flaky [chromium] › tests/features/cellGuide/cellGuide.test.ts:752:11 › Cell Guide › CellGuide Card › Ontology Viewer › Clicking on a cell type label opens its CellGuide info sidebar 3 skipped 56 passed (7.1m)

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