feat(cellguide): upload json script

[kaloster]

Reason for Change

• Backend Script - Cell Types Descriptions - Batch 2 for ready for release  #6247

This is a script to upload cellguide descriptions using the /cellguide/v1/upload endpoint.

It requires a csv file to be present in the scripts directory with the following columns:
Cell Ontology ID, Final version (QC'd), Supporting reference 1, Supporting reference 2, Supporting reference 3, Supporting reference 4, Supporting reference 5

The script will convert the csv to json and post each row to the endpoint.

Testing steps

Step 1 - Login: python upload_cellguide_descriptions.py --deployment rdev login --api_key <api_key>
Step 2 - Upload: python upload_cellguide_descriptions.py --deployment rdev upload --path cl_descriptions.csv

Notes for Reviewer

• rdev option is there for testing purposes - once reviewed and approved will be removed before merging.

[github-actions]

Deployment Summary

• backend_url: https://pr-6426-backend.rdev.single-cell.czi.technology
• frontend_url: https://pr-6426-frontend.rdev.single-cell.czi.technology
• delete_db_task_definition_arn: arn:aws:ecs:us-west-2:***:task-definition/dp-rdev-pr-6426-deletion:1
• migrate_db_task_definition_arn: arn:aws:ecs:us-west-2:***:task-definition/dp-rdev-pr-6426-migration:1

[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (63cd24a) 92.07% compared to head (d100bf1) 92.07%.

Additional details and impacted files

@@           Coverage Diff           @@
##             main    #6426   +/-   ##
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  Coverage   92.07%   92.07%           
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  Files         178      178           
  Lines       14732    14732           
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  Hits        13565    13565           
  Misses       1167     1167           

Flag	Coverage Δ
unittests	92.07% <ø> (ø)

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[atarashansky]

Left one small question, but otherwise this looks great! I'm trusting that you've tested this in rdev already..