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Parse n/a fn vals in gvf (#213)
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ivansg44 authored Jun 27, 2024
1 parent a9e6acf commit e471d5c
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion data_parser.py
Original file line number Diff line number Diff line change
Expand Up @@ -164,7 +164,7 @@ def parse_gvf_sample_variants(path):

fn_dict = mutation_dict["functions"]
fn_category = attrs["function_category"].strip('"')
if not fn_category:
if not fn_category or fn_category == "n/a":
continue
if fn_category not in fn_dict:
fn_dict[fn_category] = {}
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