Release covidcast-indicators 0.3.55 #1989
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chore: sync prod->main
* pin to rocker/tidyverse:4.2 * update Dockerfile to use pak and rspm for package installation * add workflow_dispatch button
* simplify caching (r-lib/setup-r-dependencies caches by default) * switch to Ubuntu latest * keep R on 4.2
first attempt at fixing broken backfill build
[Refactor] Add type hints to `geomap.py` and a small test refactor
feat: add aggregate_by_weighted_sum to geomapper
Weekday adjustment to use Clarabel instead of ECOS
* all linters now use the same configuration file * add `make format` command to format all code * make sure all indicators pass with the new config * update the template files as well * add a new darker format job to CI * add python package caching * update README
feat: unify linter settings across indicators and add incremental formatting
) * remove clarabel spec in weekday, pin claims_hosp cvxpy to <=1.4 and doctor_visits cvxpy to >=1.5 * add solver as param spec * Update update_sensor.py * linter * linter * default to clarabel. ecos for hosp admissions * linter * Update claims_hosp/setup.py Co-authored-by: george <george.haff@gmail.com> * Apply suggestions from George's review Co-authored-by: george <george.haff@gmail.com> * linter * linter * linter * add test get params legacy * fix test get params legacy * linter --------- Co-authored-by: george <george.haff@gmail.com>
* add patching code * add documentation * linter * fix dir name * Update get_latest_claims_name.py * remove patch var, use only issue" * issue -> issue_date for clarity * fix logger * unit test * fix unit test * lint * Update doctor_visits/delphi_doctor_visits/patch.py Co-authored-by: nmdefries <42820733+nmdefries@users.noreply.github.com> * add download and get_latest_claims_name tests * Update test_get_latest_claims_name.py test file name --------- Co-authored-by: nmdefries <42820733+nmdefries@users.noreply.github.com>
Co-authored-by: David Weber <david.weber2@pm.me>
Move pipeline manual to repo
* fix doctor_visits log location (updated to be in shared system indicators log directory) * Update doctor_visits export_dir Co-authored-by: minhkhul <118945681+minhkhul@users.noreply.github.com>
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closing this to re-create and include #1990 |
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Releasing:
Includes:
geomap.pyand a small test refactor #1706TODOs:
nsspindicator job is enabled in cronicle, and then look for data in the apinssp, and stop notifying aboutchngandhhs