Skip to content

pass *meta* information for genome input in freebayes modules #73

pass *meta* information for genome input in freebayes modules

pass *meta* information for genome input in freebayes modules #73

Triggered via pull request December 20, 2023 11:42
@bunopbunop
opened #31
issue-30
Status Failure
Total duration 3m 51s
Artifacts

pytest-workflow.yml

on: pull_request
Check for changes
4s
Check for changes
Matrix: test
Fit to window
Zoom out
Zoom in

Annotations

2 errors and 4 warnings
freebayes/chunk conda
Process completed with exit code 1.
freebayes/chunk conda
Artifact path is not valid: /pytest_workflow__48kje3v/freebayes_chunk_test_freebayes_chunk/work/9a/38332d34414ee11e66bf7c7234121e/chr22:0-40001.vcf.gz. Contains the following character: Colon : Invalid characters include: Double quote ", Colon :, Less than <, Greater than >, Vertical bar |, Asterisk *, Question mark ?, Carriage return \r, Line feed \n The following characters are not allowed in files that are uploaded due to limitations with certain file systems such as NTFS. To maintain file system agnostic behavior, these characters are intentionally not allowed to prevent potential problems with downloads on different file systems.
freebayes/single singularity
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v5. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
freebayes/multi singularity
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v5. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
freebayes/splitbam singularity
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v5. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
freebayes/chunk singularity
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v5. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/