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⬆️ update stuff #26

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wants to merge 10 commits into from
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⬆️ update stuff #26

wants to merge 10 commits into from

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@bunop bunop commented Dec 15, 2023

This is an alternative for #22 in which I update stuff but I don't move outside modules from cnr-ibba folder

PR checklist

Closes #22

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Emit the versions.yml file.
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • PROFILE=docker pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware
    • PROFILE=singularity pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware
    • PROFILE=conda pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware

@bunop bunop added bug Something isn't working dependencies Pull requests that update a dependency file enhancement New feature or request don't merge Don't merge this PR! labels Dec 15, 2023
@bunop bunop added this to the :bookmark: public release milestone Dec 15, 2023
@bunop bunop closed this Dec 18, 2023
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[BUG] move nf-core modules in nf-core subfolder
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