Fix the script to be used in conda environment

cobilab · May 2, 2019 · b098a22 · b098a22
1 parent a3172d4
commit b098a22
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Showing 4 changed files with 6 additions and 298 deletions.
diff --git a/README.md b/README.md
@@ -112,6 +112,11 @@ The GTO provides pipe support for easy integration with the majority of the tool
 5.17 gto_gede
 ``` 
 
+### 6. Scripts
+```bash
+6.1 gto_build_dbs.sh
+```
+
 ## CITE
 Please cite the followings, if you use GTO:
 J. R. Almeida, D. Pratas. GTO: the genomics toolkit, 2018.

diff --git a/bin/gto_build_dbs b/bin/gto_build_dbs
diff --git a/src/BuildDB.c b/src/BuildDB.c
diff --git a/src/Makefile b/src/Makefile
@@ -66,8 +66,7 @@ PROGS  	 	= $(BIN)/gto \
 	          $(BIN)/gto_comparative_map \
 	          $(BIN)/gto_genomic_count_bases \
 	          $(BIN)/gto_max \
-	          $(BIN)/gto_min \
-	          $(BIN)/gto_build_dbs 
+	          $(BIN)/gto_min
 
 
 
@@ -195,8 +194,6 @@ $(BIN)/gto_max: Max.c $(DEPS) $(OBJS)
 	$(CC) $(CFLAGS) -o $(BIN)/gto_max Max.c $(OBJS) $(LIBS)
 $(BIN)/gto_min: Min.c $(DEPS) $(OBJS) 
 	$(CC) $(CFLAGS) -o $(BIN)/gto_min Min.c $(OBJS) $(LIBS)
-$(BIN)/gto_build_dbs: BuildDB.c $(DEPS) $(OBJS) 
-	$(CC) $(CFLAGS) -o $(BIN)/gto_build_dbs BuildDB.c $(OBJS) $(LIBS)
 
 geco:
 	git clone https://github.com/pratas/geco2.git