Skip to content
@complextissue

Complex Tissue lab

Research group led by Prof. Victor Puelles, PhD, at Aarhus University.
README.md

Welcome to our GitHub page. We are a research group at Aarhus University, part of the Department of Clinical Medicine and the Department of Pathology.

Our research focus is the study of complex tissues using advanced imaging techniques and machine learning and AI techniques.

Pinned Loading

  1. pytximport pytximport Public

    Feature-rich Python implementation of the tximport package for gene count estimation.

    Python 30 1

Repositories

Showing 9 of 9 repositories
  • pasta Public Forked from robinsonlabuzh/pasta

    Pattern Analysis of SpaTial omics datA

    complextissue/pasta’s past year of commit activity
    TeX 0 1 0 0 Updated Dec 5, 2024
  • pytximport Public

    Feature-rich Python implementation of the tximport package for gene count estimation.

    complextissue/pytximport’s past year of commit activity
    Python 30 GPL-3.0 1 0 0 Updated Nov 28, 2024
  • easySCFr Public Forked from xleizi/easySCF
    complextissue/easySCFr’s past year of commit activity
    R 0 4 0 0 Updated Nov 27, 2024
  • pyclustree Public

    A Python alternative to `clustree` for assessing single-cell RNA-sequencing clusters.

    complextissue/pyclustree’s past year of commit activity
    Python 2 GPL-3.0 0 0 0 Updated Nov 18, 2024
  • PyDESeq2 Public Forked from owkin/PyDESeq2

    A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

    complextissue/PyDESeq2’s past year of commit activity
    Python 0 MIT 69 0 0 Updated Nov 5, 2024
  • multiSPAETI Public Forked from HiDiHlabs/multiSPAETI

    Implementation of MULTISPATI-PCA in Python

    complextissue/multiSPAETI’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Nov 1, 2024
  • snakemake-bulk-rna-seq-workflow Public

    Snakemake workflow for bulk RNA sequencing with pytximport.

    complextissue/snakemake-bulk-rna-seq-workflow’s past year of commit activity
    Python 3 GPL-3.0 0 0 0 Updated Sep 30, 2024
  • xpysom Public Forked from Manciukic/xpysom

    XPySom is a minimalistic implementation of batch Self Organizing Map algorithm

    complextissue/xpysom’s past year of commit activity
    Python 0 GPL-3.0 429 0 0 Updated Sep 20, 2023
  • .github Public
    complextissue/.github’s past year of commit activity
    0 0 0 0 Updated Feb 2, 2023

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…