- bug fix: saveTOMs disabled by default but can be enabled by with the option
--wgcnaParameters "saveTOMs=TRUE"
- bug fix: issue parsing boolean WGCNA parameters (e.g.
saveTOMs=FALSE
orcosineCorrelation=TRUE
) resolved - new parameter added:
--gzipTOMs
which will gzip TOM .RData files as generated to save space - available on PyPI