Update muon_analysis.py #4537
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - master | |
| tags: | |
| - '**' | |
| pull_request: | |
| env: | |
| NUMBA_NUM_THREADS: 1 | |
| MPLBACKEND: Agg | |
| PYTEST_ADDOPTS: --color=yes | |
| jobs: | |
| pyflakes: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.8 | |
| - name: pyflakes | |
| run: | | |
| pip install pyflakes | |
| pyflakes lstchain | |
| tests: | |
| needs: pyflakes | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| matrix: | |
| python-version: [3.8] | |
| ctapipe-version: [v0.12.0] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Prepare mamba installation | |
| env: | |
| PYTHON_VERSION: ${{ matrix.python-version }} | |
| run: | | |
| # setup correct python version | |
| sed -i -e "s/- python=.*/- python=$PYTHON_VERSION/g" environment.yml | |
| - name: Mamba setup | |
| uses: mamba-org/provision-with-micromamba@v14 | |
| with: | |
| environment-name: "lst-dev" | |
| environment-file: environment.yml | |
| - name: Install dependencies | |
| env: | |
| PYTHON_VERSION: ${{ matrix.python-version }} | |
| CTAPIPE_VERSION: ${{ matrix.ctapipe-version }} | |
| run: | | |
| python --version | |
| echo "Installing additional pip packages" | |
| # we install ctapipe using pip to be able to select any commit, e.g. the current master | |
| pip install \ | |
| "git+https://github.com/cta-observatory/ctapipe@$CTAPIPE_VERSION" \ | |
| pytest-cov 'coverage!=6.3.0' pytest-xdist | |
| echo "pip install -e ." | |
| pip install -e . | |
| - name: Download test data | |
| env: | |
| TEST_DATA_USER: ${{ secrets.test_data_user }} | |
| TEST_DATA_PASSWORD: ${{ secrets.test_data_password }} | |
| run: | | |
| ./download_test_data.sh | |
| - name: Tests | |
| run: | | |
| pytest -n auto --dist loadscope --cov --cov-report=xml -m 'private_data or not private_data' lstchain | |
| - uses: codecov/codecov-action@v1 | |
| with: | |
| # disable gcov, not needed | |
| functionalities: gcov | |
| docs: | |
| needs: pyflakes | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.8 | |
| - name: Install doc dependencies | |
| run: | | |
| sudo apt update --yes && sudo apt install --yes git build-essential pandoc graphviz | |
| pip install -U pip setuptools wheel | |
| pip install -e .[docs] | |
| git describe --tags | |
| python -c 'import lstchain; print(lstchain.__version__)' | |
| - name: Build docs | |
| run: cd docs && make html SPHINXOPTS="-W --keep-going -n --color -j auto" | |
| - name: Deploy to gihub pages | |
| # only run on push to master | |
| if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/master' }} | |
| uses: JamesIves/github-pages-deploy-action@3.7.1 | |
| with: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| BRANCH: gh-pages | |
| FOLDER: docs/_build/html | |
| CLEAN: true | |
| SINGLE_COMMIT: true |