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Update muon_analysis.py #4538

Update muon_analysis.py

Update muon_analysis.py #4538

Workflow file for this run

name: CI
on:
push:
branches:
- master
tags:
- '**'
pull_request:
env:
NUMBA_NUM_THREADS: 1
MPLBACKEND: Agg
PYTEST_ADDOPTS: --color=yes
jobs:
pyflakes:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: 3.8
- name: pyflakes
run: |
pip install pyflakes
pyflakes lstchain
tests:
needs: pyflakes
runs-on: ubuntu-latest
defaults:
run:
shell: bash -l {0}
strategy:
matrix:
python-version: [3.8]
ctapipe-version: [v0.12.0]
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- name: Prepare mamba installation
env:
PYTHON_VERSION: ${{ matrix.python-version }}
run: |
# setup correct python version
sed -i -e "s/- python=.*/- python=$PYTHON_VERSION/g" environment.yml
- name: Mamba setup
uses: mamba-org/provision-with-micromamba@v14
with:
environment-name: "lst-dev"
environment-file: environment.yml
- name: Install dependencies
env:
PYTHON_VERSION: ${{ matrix.python-version }}
CTAPIPE_VERSION: ${{ matrix.ctapipe-version }}
run: |
python --version
echo "Installing additional pip packages"
# we install ctapipe using pip to be able to select any commit, e.g. the current master
pip install \
"git+https://github.com/cta-observatory/ctapipe@$CTAPIPE_VERSION" \
pytest-cov 'coverage!=6.3.0' pytest-xdist
echo "pip install -e ."
pip install -e .
- name: Download test data
env:
TEST_DATA_USER: ${{ secrets.test_data_user }}
TEST_DATA_PASSWORD: ${{ secrets.test_data_password }}
run: |
./download_test_data.sh
- name: Tests
run: |
pytest -n auto --dist loadscope --cov --cov-report=xml -m 'private_data or not private_data' lstchain
- uses: codecov/codecov-action@v1
with:
# disable gcov, not needed
functionalities: gcov
docs:
needs: pyflakes
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- name: Set up Python
uses: actions/setup-python@v4
with:
python-version: 3.8
- name: Install doc dependencies
run: |
sudo apt update --yes && sudo apt install --yes git build-essential pandoc graphviz
pip install -U pip setuptools wheel
pip install -e .[docs]
git describe --tags
python -c 'import lstchain; print(lstchain.__version__)'
- name: Build docs
run: cd docs && make html SPHINXOPTS="-W --keep-going -n --color -j auto"
- name: Deploy to gihub pages
# only run on push to master
if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/master' }}
uses: JamesIves/github-pages-deploy-action@3.7.1
with:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
BRANCH: gh-pages
FOLDER: docs/_build/html
CLEAN: true
SINGLE_COMMIT: true