Update muon_analysis.py #4540
Workflow file for this run
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name: CI | |
on: | |
push: | |
branches: | |
- master | |
tags: | |
- '**' | |
pull_request: | |
env: | |
NUMBA_NUM_THREADS: 1 | |
MPLBACKEND: Agg | |
PYTEST_ADDOPTS: --color=yes | |
jobs: | |
pyflakes: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: 3.8 | |
- name: pyflakes | |
run: | | |
pip install pyflakes | |
pyflakes lstchain | |
tests: | |
needs: pyflakes | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash -l {0} | |
strategy: | |
matrix: | |
python-version: [3.8] | |
ctapipe-version: [v0.12.0] | |
steps: | |
- uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 | |
- name: Prepare mamba installation | |
env: | |
PYTHON_VERSION: ${{ matrix.python-version }} | |
run: | | |
# setup correct python version | |
sed -i -e "s/- python=.*/- python=$PYTHON_VERSION/g" environment.yml | |
- name: Mamba setup | |
uses: mamba-org/provision-with-micromamba@v14 | |
with: | |
environment-name: "lst-dev" | |
environment-file: environment.yml | |
- name: Install dependencies | |
env: | |
PYTHON_VERSION: ${{ matrix.python-version }} | |
CTAPIPE_VERSION: ${{ matrix.ctapipe-version }} | |
run: | | |
python --version | |
echo "Installing additional pip packages" | |
# we install ctapipe using pip to be able to select any commit, e.g. the current master | |
pip install \ | |
"git+https://github.com/cta-observatory/ctapipe@$CTAPIPE_VERSION" \ | |
pytest-cov 'coverage!=6.3.0' pytest-xdist | |
echo "pip install -e ." | |
pip install -e . | |
- name: Download test data | |
env: | |
TEST_DATA_USER: ${{ secrets.test_data_user }} | |
TEST_DATA_PASSWORD: ${{ secrets.test_data_password }} | |
run: | | |
./download_test_data.sh | |
- name: Tests | |
run: | | |
pytest -n auto --dist loadscope --cov --cov-report=xml -m 'private_data or not private_data' lstchain | |
- uses: codecov/codecov-action@v1 | |
with: | |
# disable gcov, not needed | |
functionalities: gcov | |
docs: | |
needs: pyflakes | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 | |
- name: Set up Python | |
uses: actions/setup-python@v4 | |
with: | |
python-version: 3.8 | |
- name: Install doc dependencies | |
run: | | |
sudo apt update --yes && sudo apt install --yes git build-essential pandoc graphviz | |
pip install -U pip setuptools wheel | |
pip install -e .[docs] | |
git describe --tags | |
python -c 'import lstchain; print(lstchain.__version__)' | |
- name: Build docs | |
run: cd docs && make html SPHINXOPTS="-W --keep-going -n --color -j auto" | |
- name: Deploy to gihub pages | |
# only run on push to master | |
if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/master' }} | |
uses: JamesIves/github-pages-deploy-action@3.7.1 | |
with: | |
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
BRANCH: gh-pages | |
FOLDER: docs/_build/html | |
CLEAN: true | |
SINGLE_COMMIT: true |