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allow recursive search with glob pattern #1286

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merged 1 commit into from
Sep 6, 2024
Merged

allow recursive search with glob pattern #1286

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4 changes: 2 additions & 2 deletions lstchain/scripts/lstchain_merge_hdf5_files.py
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Original file line number Diff line number Diff line change
Expand Up @@ -96,10 +96,10 @@ def main():
run = f'Run{args.run_number:05d}'
file_list = sorted(filter(
lambda f: run in f,
glob(os.path.join(args.input_dir, args.pattern))
glob(os.path.join(args.input_dir, args.pattern), recursive=True)
))
else:
file_list = sorted(glob(os.path.join(args.input_dir, args.pattern)))
file_list = sorted(glob(os.path.join(args.input_dir, args.pattern), recursive=True))

if args.no_image:
keys = get_dataset_keys(file_list[0])
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4 changes: 2 additions & 2 deletions lstchain/scripts/lstchain_merge_muon_files.py
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Original file line number Diff line number Diff line change
Expand Up @@ -53,10 +53,10 @@
run = f'Run{args.run_number:05d}'
file_list = sorted(filter(
lambda f: run in f,
glob(os.path.join(args.srcdir, args.pattern))
glob(os.path.join(args.srcdir, args.pattern), recursive=True)
))
else:
file_list = sorted(glob(os.path.join(args.srcdir, args.pattern)))
file_list = sorted(glob(os.path.join(args.srcdir, args.pattern), recursive=True))

Check warning on line 59 in lstchain/scripts/lstchain_merge_muon_files.py

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lstchain/scripts/lstchain_merge_muon_files.py#L59 

Added line #L59 was not covered by tests

if not file_list:
raise IOError(f'No muon files in {args.srcdir} with the parameters requested')
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