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Working from home
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Working from home
4 followers · 19 following
  • São Paulo, Brazil

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danimelsz/README.md

Welcome to my repositories

About me

  • Name: Daniel Yudi Miyahara Nakamura

  • Education: Biologist (University of São Paulo, 2017–2021) and data scientist.

  • Current position: PhD Student in Bioinformatics at University of São Paulo

  • Skills: Python, R, Bash using phylogenetic methods (ape, phytools, TNT, POY, IQ-Tree, RaxMl), network analyses (igraph and bipartite), statistical models (LMs, GLMs, LMMs, GLMMs, Bayesian Models), and Machine Learning (caret, scikit-learn, TensorFlow)

  • E-mail: dani_ymn@usp.br

  • Pronouns: he/him

Popular repositories Loading

  1. danimelsz danimelsz Public

    Jupyter Notebook

  2. EqualLength EqualLength Public

    Testing the impact of treating equal length sequences statically (i.e. prealigned) and dynamically (i.e. non-aligned and thus prone to be directly optimized) in parsimony analyses using POY.

    R

  3. supportParsimony supportParsimony Public

    Testing the correlation between resampling metrics and optimality-based support using phylogenetic and phylogenomic datasets

    HTML

  4. ResinNetwork ResinNetwork Public

    Resin foraging interactions analyzed with multilayer networks

    TeX 1

  5. hDNA_Dendropsophus hDNA_Dendropsophus Public

  6. RNODE RNODE Public

    HTML