Protein language models using attention models
DEPRECATED: Code refactored and released in new repo: https://github.com/nadavbra/protein_bert
- Pip package: pip install protein-bert
- This repo contained development code for ProteinBERT and some code used during the CAFA competition.
Our paper is out!
If you use ProteinBERT, we ask that you cite our paper:
Brandes, N., Ofer, D., Peleg, Y., Rappoport, N. & Linial, M. ProteinBERT: A universal deep-learning model of protein sequence and function. bioRxiv (2021). https://doi.org/10.1101/2021.05.24.445464