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@dholab

David H. O'Connor Lab at University of Wisconsin—Madison

Located in University of Wisconsin—Madison's AIDS Vaccine Research Laboratory

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  1. nvd nvd Public

    Opinionated viral metagenomics workflow

    Python 10 3

  2. dairy-hpai-monitoring dairy-hpai-monitoring Public

    Real-Time Monitoring of HPAI Detections in One or More Dairy Products in the United States

    Python 9 2

  3. SNAILS SNAILS Public

    Small Nucleic Acid Instrument for Long Sequences

    Python 3

  4. air-metagenomics air-metagenomics Public archive

    Analysis Pipeline for Minor and Ramuta et al. 2023: Metagenomic sequencing detects human respiratory and enteric viruses in air samples collected from congregate settings

    Nextflow 3 1

  5. mhc_genotyper mhc_genotyper Public

    MHC Class I and II genotyper for Non-Human primates with high-accuracy short reads

    Jupyter Notebook 1

  6. htcondor_basecalling htcondor_basecalling Public

    Shell scripts, submit files, and dag files for basecalling Oxford Nanopore signal files on CHTC's HTCondor cluster

    Shell 1

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