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@dimi-lab

DIMI lab

Data science and Informatics for Multiomics Integration

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  1. dimi-lab.github.io dimi-lab.github.io Public template

    Data science and Informatics for Multiomics Integration

    HTML 3

  2. SpaFlow SpaFlow Public

    A Nextflow pipeline for QC and unsupervised clustering of spatial biology data

    Nextflow 8 2

  3. The_Handy_OMERO_Toolbox The_Handy_OMERO_Toolbox Public

    An assortment of scripts used to interface with our internal instance of OMERO and accomplish custom tasks

    Jupyter Notebook 1

Repositories

Showing 10 of 15 repositories
  • qupath-extension-cloud-omezarr Public

    QuPath extension to load OME-Zarr images from cloud storage

    dimi-lab/qupath-extension-cloud-omezarr’s past year of commit activity
    Kotlin 0 GPL-3.0 0 1 0 Updated Mar 28, 2025
  • deepCSeq_evaluation Public
    dimi-lab/deepCSeq_evaluation’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Mar 28, 2025
  • ClassyFlow Public

    In Development nextflow workflow specific to outlining approaches to building and testing ML classifiers

    dimi-lab/ClassyFlow’s past year of commit activity
    Python 1 MIT 3 3 0 Updated Mar 26, 2025
  • MultimodalityHistoComb Public

    Combining multimodality histopathology images for integrated cancer research

    dimi-lab/MultimodalityHistoComb’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Mar 14, 2025
  • drpllm Public
    dimi-lab/drpllm’s past year of commit activity
    Python 0 0 0 0 Updated Mar 14, 2025
  • SpaFlow Public

    A Nextflow pipeline for QC and unsupervised clustering of spatial biology data

    dimi-lab/SpaFlow’s past year of commit activity
    Nextflow 8 MIT 2 0 0 Updated Mar 4, 2025
  • PPAR Public

    The Rank order prediction of genes for a given set of phenotypes for mendelian and rare disease framework (RPAR)

    dimi-lab/PPAR’s past year of commit activity
    Jupyter Notebook 6 MIT 1 0 0 Updated Feb 19, 2025
  • dimi-lab.github.io Public template

    Data science and Informatics for Multiomics Integration

    dimi-lab/dimi-lab.github.io’s past year of commit activity
    HTML 0 BSD-3-Clause 3 0 2 Updated Jan 16, 2025
  • SCdeconR Public
    dimi-lab/SCdeconR’s past year of commit activity
    HTML 0 GPL-3.0 0 0 0 Updated Dec 20, 2024
  • STITCH Public
    dimi-lab/STITCH’s past year of commit activity
    R 0 0 0 0 Updated Dec 20, 2024
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