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A Dockerized wrapper for converting OpenSlide-compatible files to DICOM format using the WSI-to-DICOM converter. Perfect for digital pathology and other domains requiring efficient and cross-platform WSI to DICOM conversion.

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donin1129/WsiToDicomConverter

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This project is a simple wrapper that uses https://github.com/GoogleCloudPlatform/wsi-to-dicom-converter in docker.

To convert a openslide (https://openslide.org/) compatible file, please add the files into ./samples folder. There are two example files inside already. Do not forget to remove them if you don;t want them converted to dcm files. Afterwards, simply run

docker compose -f "service.yml" up --build

and the result will be found in ./out folder.

Feel free to change the setting in service.yml when needed.

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A Dockerized wrapper for converting OpenSlide-compatible files to DICOM format using the WSI-to-DICOM converter. Perfect for digital pathology and other domains requiring efficient and cross-platform WSI to DICOM conversion.

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