[WIP] Review and optimize code for operability and security

[Copilot]

Repository Audit & Optimization Plan

Phase 1: Critical Fixes (Breaking Issues)

• Fix case-sensitive path issue: Documentation/ → documentation/ in all markdown files (101 references found)
• Remove backup files that shouldn't be in repo (.bak.* files already in .gitignore but not removed from git)

Phase 2: Code Quality & Security

• Review Python code in examples/01-hello-api for security vulnerabilities
• Check for hardcoded secrets or credentials
• Validate error handling and logging practices
• Ensure type hints are complete and accurate

Phase 3: Testing & CI/CD

• Verify test coverage is adequate
• Check CI/CD workflow configurations
• Ensure all tests can run successfully

Phase 4: Documentation Accuracy

• Verify all internal links work correctly
• Remove redundant or outdated documentation
• Ensure documentation matches actual code/structure
• Update any misleading or inaccurate content

Phase 5: Code Optimization

• Review for inefficiencies in Python code
• Check for redundant code patterns
• Optimize imports and dependencies
• Ensure modern Python practices are used

Phase 6: Final Validation

• Run all linters and formatters
• Run full test suite
• Validate all documentation links
• Review changes for completeness

Original prompt

Please review all the code within this repo and ensure full operability. Also, review for errors, redundancies, security vulnerabilities, and other repairable ineffeciencies. Then, repair them, optimize the code, and update the documentation to be completely up to date, honest, and free from redundant or non-benefit providing content.

Custom agent used: Dieter
Comprehensive, personalized instruction set for AI coding agents working on the sonotheia-examples repository. This prompt integrates all repository standards, best practices, and behavioral guidelines into a unified, actionable framework.

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