Skip to content

Releases: drieslab/Giotto

v0.3.6

06 Oct 19:01
Compare
Choose a tag to compare

Version before the release of Giotto v1.0.0

v0.3.5

14 Jun 23:40
Compare
Choose a tag to compare

Release version with Giotto webinar on 2020-06-11.

v0.3.2

28 May 01:45
Compare
Choose a tag to compare

BioRXiv version

v0.3.1

10 Apr 20:14
Compare
Choose a tag to compare
  • includes automatic installation of python modules
  • update on visualization options
  • bug fixes

v0.2.0

20 Mar 00:39
Compare
Choose a tag to compare
fix network bug

v0.1.4

08 Dec 21:33
Compare
Choose a tag to compare

Notable changes:

  • works with 10X Visium Spatial Gene expression data
  • improved interaction with Giotto Viewer
  • improved gene enrichment functions

v0.1.3

30 Nov 20:11
Compare
Choose a tag to compare

Notable changes:

  • update visualization for 2D and 3D
  • tools to identify spatial enrichment of cell-type signatures
  • added an instruction file for automation
  • automatic saving of plots
  • examples with multiple datasets

v0.1.2

30 Aug 23:13
Compare
Choose a tag to compare

Notable changes:

  • update visualization for 3D data
  • add MAST as an option for differential expression
  • implemented spatialDE for detection of spatial patterns
  • additional functions to select gene and cell threshold
  • speed improvements

v0.1.1

24 Jul 17:41
Compare
Choose a tag to compare

Notable changes:

  • all parameters are standardized with underscores instead of dots
  • update of cortex example
  • update of dependencies

v0.1.0

22 Jul 13:34
Compare
Choose a tag to compare

Version 0.1.0 -- beta release

First release of Giotto.