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update website to v0.2.3
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- also remove tests files and unnecessary GHA
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jiajic committed Mar 22, 2024
2 parents 61193d9 + 6d9d385 commit fbb187a
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63 changes: 0 additions & 63 deletions .github/workflows/covr.yml

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64 changes: 0 additions & 64 deletions .github/workflows/dev_check.yml

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62 changes: 0 additions & 62 deletions .github/workflows/lintr.yml

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87 changes: 0 additions & 87 deletions .github/workflows/main_check.yml

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1 change: 1 addition & 0 deletions .gitignore
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Expand Up @@ -7,3 +7,4 @@ inst/doc
.vscode/*
.Rprofile
docs
codecov.yml
8 changes: 4 additions & 4 deletions DESCRIPTION
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@@ -1,6 +1,6 @@
Package: GiottoClass
Title: Giotto Suite object definitions and framework
Version: 0.1.3
Version: 0.2.3
Authors@R: c(
person("Ruben", "Dries", email = "rubendries@gmail.com",
role = c("aut", "cre")),
Expand All @@ -24,7 +24,7 @@ Description: This package contains the Giotto object and subobject class
License: GPL (>= 3)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
RoxygenNote: 7.3.1
Depends:
base (>= 3.5.0),
utils (>= 3.5.0),
Expand All @@ -34,7 +34,7 @@ Imports:
data.table (>= 1.12.2),
dbscan (>= 1.1-3),
deldir (>= 1.0.6),
GiottoUtils (>= 0.1.3),
GiottoUtils (>= 0.1.6),
igraph (>= 1.2.4.1),
magick,
Matrix (>= 1.6.2),
Expand Down Expand Up @@ -79,10 +79,10 @@ Suggests:
Remotes: drieslab/GiottoUtils
Config/testthat/edition: 3
Collate:
'NN_network.R'
'package_imports.R'
'classes.R'
'generics.R'
'NN_network.R'
'aggregate.R'
'auxilliary.R'
'combine_metadata.R'
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5 changes: 5 additions & 0 deletions NAMESPACE
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Expand Up @@ -76,6 +76,7 @@ export(createGiottoPolygonsFromMask)
export(createMetafeats)
export(createNearestNetObj)
export(createNearestNetwork)
export(createNetwork)
export(createSpatEnrObj)
export(createSpatLocsObj)
export(createSpatNetObj)
Expand All @@ -100,6 +101,7 @@ export(create_spat_locs_obj)
export(create_spat_net_obj)
export(cropGiottoLargeImage)
export(distGiottoImage)
export(edge_distances)
export(estimateImageBg)
export(evaluate_input)
export(fDataDT)
Expand Down Expand Up @@ -360,6 +362,9 @@ import(data.table)
import(utils)
importClassesFrom(terra,SpatExtent)
importClassesFrom(terra,SpatVector)
importFrom(GiottoUtils,getDistinctColors)
importFrom(GiottoUtils,getMonochromeColors)
importFrom(GiottoUtils,getRainbowColors)
importFrom(grDevices,dev.size)
importFrom(graphics,legend)
importFrom(graphics,par)
Expand Down
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