Merge pull request #75 from jiajic/main

Update 01_session4.Rmd
drieslab · Aug 5, 2024 · eaa7065 · eaa7065
2 parents e86aa44 + 05a8923
commit eaa7065
Showing 1 changed file with 4 additions and 2 deletions.
diff --git a/01_session4.Rmd b/01_session4.Rmd
@@ -301,7 +301,7 @@ plot(gpoly, type = "centroid")
 plot(gpoly, max_poly = 10)
 ```
 
-```{r, echo=FALSE, fig.cap="giottoPolygon plots. default (left), plotting "centroids" (middle), auto changing to centroids after there are more polygons to plot than max_poly param (right)"}
+```{r, echo=FALSE, fig.cap="giottoPolygon plots. default (left), plotting centroids (middle), auto changing to centroids after there are more polygons to plot than max_poly param (right)"}
 knitr::include_graphics("img/01_session4/gpoly_plots.png")
 ```
 
@@ -354,9 +354,11 @@ knitr::include_graphics("img/01_session4/additive_baseplot.png")
 
 ### Giotto object plotting
 
-
+Giotot
 Here we load the vizgen mini dataset from _GiottoData_ which contains a lot of worked out data.
 
+
+
 ```{r}
 g <- GiottoData::loadGiottoMini("vizgen")
 activeSpatUnit(g) <- "aggregate" # set default spat_unit to the one with lots of results