Lib supporting Qt6 version of the app #203
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…odel to lib (#183) * renaming from item to assembly * collections are together in folder * moving responsibilities from model to sample * rename experiment to model * test for sample * ruff * get classes from module * add Multilayer assembly if none * cleaning of sample * experiment to model and new sample structure * Update src/easyreflectometry/sample/collections/sample.py * update jupyter
…to lib (#185) * renaming from item to assembly * collections are together in folder * moving responsibilities from model to sample * rename experiment to model * test for sample * ruff * get classes from module * functionality for material collection * added default collection * add material adjusted * model will create assembly if called with none * Collections are now with just a single element * code cleaning * default collections * base collection introduced * no need for base_element_collection * introduced default collection * names in base collection * tests
* handle empty sample * code cleaning
…be moved from the app to the lib (#189) * first extraction steps * use data container * most parts are wokring * still some work needs to be done on experiments data * added reset * added save * added load * added functionality * more flexible * bug fix * default project * add materials * test for default * current_path to projeckt_path * project * tests update * reset functionality * reset * project * streamlining * code cleaning * code cleaning * from project_path to path * fix path * pr response * added test for creation of empty collections * pyproject
* minor adjustments * fix to create * slight renaming * set created when project is loaded * pr response * ruff * change test comparing files * test file changes
…192) * from materials collection to base collection * added color to Model * renaming up and down to be consistent with other code * adjusted collections * placeholder for calculated data * ready to expose data * datastore and tests * added functionality * code cleaning * explicit clean global obejct for surfactant tests * unique name in surfactant and layer area per molecule * code clean * code cleaning * code cleaning * pr response * pr response and tests * pr response
…ing lib data (#196) * expose reflectivity data * sld profile in project * reflectivity curve with 500 datapoints * code cleaning * remove fir_function from calculator_base * default minimizer * pr response * ruff
… the app (#198) * experiments and q values * pass all four elements in datapoint * adjust tests and set resolution function when loading measured data * from steps to resolution
* minor functionality and code cleaning * expose parameters * added method to fit data in DataSet1D formar * syntax fit * rename method * ruff * sample index in project * est all indicies * indicies setters updated * bug indicies * material index * layer index * index to zero rather than none * only parameters in project * load and save project with experimental data * only be recursive on dicts * enabling load and save * load fix when no experiments * default info updated * name for add model * renameelement added to collections * added most used materials to project * add material in get index of given material * minor adjustments to model and sample * latest version of easyscience * update adding element to collection * ruff * fitter as property * added tests
* first summary element * refinement section * test rename * utils with counting * experiments section * html summary * skeleton parameter * replace in template * paramaters as table * html formatting * html formatting * summary formatting * constained parameters * constraints in summary * summary * cleaning project info * pdf summary * summary update * code cleaning * figures in summary * only figures when requested * legends and eps files * back to jpg * notebook for project object * text adjustments project notebook * link to pdf * always add project information * pr response * reduce code complexity * trying to understand CodeFactor * more CodeFactor * trying to make CodaFactor happy * CodaFactor problems * CodeFactor * codefactor * cidefactor * codefactor * codefactor * code factor * codefactor * code factor * CodeFactor * code factor * code factor * codefactor * codafactor not using free * code factor * code factor * code facoter * count functionality back to utils
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Project class to serve as an API for the APP
Moved functionality from the APP to the LIB